Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyphochytrium_20catenoides_20[genbank_20GCA_5F000327025.2_202011-11- 01] 311,983 sequences; 85,142,588 total letters Query= AAMG01001844.1 Length=290 Score E Sequences producing significant alignments: (Bits) Value seq143330 140 5e-31 seq102257 136 7e-30 seq143329 104 4e-20 seq233047 89.7 8e-16 seq116444 73.4 7e-11 >seq143330 Length=138 Score = 140 bits (154), Expect = 5e-31 Identities = 98/112 (88%), Gaps = 0/112 (0%) Strand=Plus/Minus Query 167 TTTCACATCTGACTTGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAAC 226 || |||||| ||||| |||||| | ||| |||||| |||||||| |||||| ||| Sbjct 128 TTCCACATCAGACTTAAGAAACCGCCTGCGCGCGCTTTACGCCCAATAATTCCGGACAAC 69 Query 227 GCTTGCCACCTACGTATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTT 278 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 68 GCTTGCCACCTACGTATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTT 17 >seq102257 Length=583 Score = 136 bits (150), Expect = 7e-30 Identities = 105/125 (84%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60 ||||||||||||| ||||||||||||||||| |||| | ||||||||||||| ||||| Sbjct 363 CCCACGCTTTCGCTCCTCAGCGTCAGTTACTACCCAGAGACCCGCCTTCGCCACCGGTGT 422 Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120 |||||| |||||| |||||||||||||||||| |||||||| | || || || || Sbjct 423 TCCTCCTGATATCTGCGCATTTCACCGCTACACCAGGAATTCCAGTCTCCCCTGTAGTAC 482 Query 121 TCAAG 125 ||||| Sbjct 483 TCAAG 487 >seq143329 Length=135 Score = 104 bits (114), Expect = 4e-20 Identities = 106/136 (78%), Gaps = 2/136 (1%) Strand=Plus/Plus Query 47 TTCGCCACTGGTGTTCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGAT 106 |||||||||||||||||||| || |||||||||||||||||||||| |||||||| | Sbjct 1 TTCGCCACTGGTGTTCCTCCACATCTCTACGCATTTCACCGCTACACGTGGAATTCCACT 60 Query 107 TGCCTCTCCAGCACTCAAGAAAAACAGTTTCAAATGCAGGCT-ATGGGTTGAGCCCATAG 165 ||||| | ||||||||| ||||||| |||| | || ||||||||| | Sbjct 61 CTCCTCTTCTGCACTCAAGTTCCCCAGTTTCCAATG-ACCCTCCCCGGTTGAGCCGGGGG 119 Query 166 TTTTCACATCTGACTT 181 ||||||||| ||||| Sbjct 120 CTTTCACATCAGACTT 135 >seq233047 Length=482 Score = 89.7 bits (98), Expect = 8e-16 Identities = 64/74 (86%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 217 TCCGGATAACGCTTGCCACCTACGTATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGC 276 |||||| |||||| || ||||||||||||||||||||||||||||||||| |||| || Sbjct 1 TCCGGACAACGCTCGCACCCTACGTATTACCGCGGCTGCTGGCACGTAGTTGGCCGGTGC 60 Query 277 TTATTCCTCAGGTA 290 || ||| |||||| Sbjct 61 TTCTTCTCCAGGTA 74 >seq116444 Length=81 Score = 73.4 bits (80), Expect = 7e-11 Identities = 61/75 (81%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 184 CTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTAT 243 ||| ||||||||| | |||||| |||| | || | |||||||||||| || ||||| Sbjct 75 CTTGCCGCCTACAGACGCTTTACGCCCAGTTAAAGTGAATAACGCTTGCCCCCCCCGTAT 16 Query 244 TACCGCGGCTGCTGG 258 ||||||||||||||| Sbjct 15 TACCGCGGCTGCTGG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 826295088493