Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyphochytrium_20catenoides_20[genbank_20GCA_5F000327025.2_202011-11- 01] 311,983 sequences; 85,142,588 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq232671 113 9e-23 seq2802 95.1 2e-17 seq125217 87.8 3e-15 seq211149 82.4 1e-13 seq2801 78.8 2e-12 >seq232671 Length=81 Score = 113 bits (124), Expect = 9e-23 Identities = 65/67 (97%), Gaps = 0/67 (0%) Strand=Plus/Plus Query 104 GAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCT 163 |||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 1 GAAGTTGGAGGCAATAACAGGTCTGTGATGCCCTTAGATGCTCTGGGCCGCACGCGCGCT 60 Query 164 ACACTGA 170 ||||||| Sbjct 61 ACACTGA 67 >seq2802 Length=82 Score = 95.1 bits (104), Expect = 2e-17 Identities = 61/67 (91%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 262 CTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCC 321 ||| |||||||||| |||||||| |||| ||||||||| ||| ||||||||||||||||| Sbjct 82 CTTGAACGAGGAATTCCTAGTAAACGCGAGTCATCAGCTCGCATTGATTACGTCCCTGCC 23 Query 322 CTTTGTA 328 ||||||| Sbjct 22 CTTTGTA 16 >seq125217 Length=81 Score = 87.8 bits (96), Expect = 3e-15 Identities = 62/71 (87%), Gaps = 0/71 (0%) Strand=Plus/Plus Query 229 TCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGC 288 ||||||| |||||||| |||||||||||||| ||| |||||||||| |||||||| ||| Sbjct 9 TCGTGCTAGGGATAGACCATTGCAATTATTGGACTTGAACGAGGAATTCCTAGTAAACGC 68 Query 289 GTGTCATCAGC 299 ||||||||| Sbjct 69 TAGTCATCAGC 79 >seq211149 Length=81 Score = 82.4 bits (90), Expect = 1e-13 Identities = 65/78 (83%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 146 CTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGT 205 ||||||||||||||||||||||||| | |||||||||| |||||||||| | | | Sbjct 1 CTGGGCCGCACGCGCGCTACACTGATGCATTCAACGAGTTCTTCACCTTGGCTGAAGAGC 60 Query 206 CTGGGTAATCTTGTTAAA 223 |||||||||||| | ||| Sbjct 61 CTGGGTAATCTTCTGAAA 78 >seq2801 Length=81 Score = 78.8 bits (86), Expect = 2e-12 Identities = 64/78 (82%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 146 CTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGT 205 ||||||||||||||||||||||||| | ||||||||| |||||||||| | | | Sbjct 1 CTGGGCCGCACGCGCGCTACACTGATGCATTCAACGAGTTTTTCACCTTGGCTGAAGAGC 60 Query 206 CTGGGTAATCTTGTTAAA 223 |||||||||||| | ||| Sbjct 61 CTGGGTAATCTTCTGAAA 78 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944244897024