Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyphochytrium_20catenoides_20[genbank_20GCA_5F000327025.2_202011-11- 01] 311,983 sequences; 85,142,588 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq751 120 1e-24 seq286883 107 6e-21 seq190176 95.1 4e-17 seq298176 86.0 2e-14 >seq751 Length=150 Score = 120 bits (132), Expect = 1e-24 Identities = 89/104 (86%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 97 CCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAA 156 |||||||||| |||| ||||||| |||||||| ||||| ||||||||||||||||| Sbjct 1 CCGAACCCACGTATGTGGAAAAATACGGGGATGATTTGTGGATAGGGGTGAAAGGCTAAT 60 Query 157 CAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTATTTAGGTAG 200 |||||||||| |||||||||| || ||||| ||||| |||||| Sbjct 61 CAAACTTGGACATAGCTGGTTTTCCGCGAAATCTATTGAGGTAG 104 >seq286883 Length=157 Score = 107 bits (118), Expect = 6e-21 Identities = 89/108 (82%), Gaps = 2/108 (2%) Strand=Plus/Minus Query 2 CGAGTCCGAACAGGGCGAC--AGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCA 59 |||||| ||| |||||| |||||| |||| |||||||||| | ||||||||||||| Sbjct 115 CGAGTCTGAATAGGGCGTTTGAGTCGCCGGGTCTAGACCCGAAGCGGAGTGATCTACCCA 56 Query 60 TGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACT 107 |||||||| ||||| |||||| ||| | |||||| ||||||||||| Sbjct 55 TGGCCAGGGTGAAGCGACGGTAAGACGTCGTGGAGGCCCGAACCCACT 8 >seq190176 Length=609 Score = 95.1 bits (104), Expect = 4e-17 Identities = 158/226 (70%), Gaps = 3/226 (1%) Strand=Plus/Minus Query 273 CAAACTCCGAATGCGCATCAGTTTTACCGCGGGAGTGAGGGCATGGGTGCTAAGGTCCGT 332 |||||||||||||| | ||| | | || |||||| ||| | |||||| ||| Sbjct 559 CAAACTCCGAATGCCGGTAAGTGAGAGTGTGGCAGTGAGACTGCGGGCGATAAGGTTCGT 500 Query 333 GCCCGAGAGGAGAAGAATCCGGACTATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAA 392 ||||||| || || || || | ||||||||||| || | |||||| || Sbjct 499 AGTCGAGAGGGAAACAACCCAGATCGCCGGCTAAGGCCCCTAAGCGTGTACTAAGTGGAA 440 Query 393 CTAACGAAGTCTGATTGCTAAGACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTA 452 || || || | | || |||||| | |||| |||||||| |||||||||| | || | Sbjct 439 --AAGGATGTGGGGTCGCGAAGACAACCAGGAGGTTGGCTTAGAAGCAGCCACCC-TTGA 383 Query 453 AAGAGTGCGTAACAGCTCACTAGTCGAGGAGTCGGGCGTGGATAAT 498 |||||||||||| |||||||| ||| || ||| ||| || ||| Sbjct 382 AAGAGTGCGTAATAGCTCACTGGTCAAGTGGTCCTGCGCCGACAAT 337 >seq298176 Length=132 Score = 86.0 bits (94), Expect = 2e-14 Identities = 60/67 (90%), Gaps = 1/67 (1%) Strand=Plus/Minus Query 414 GACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACT 473 |||| | ||||||||||||| |||||||||| |||||||||||||||||| |||||||| Sbjct 131 GACAACCAGGATGTTGGCTTAGAAGCAGCCAC-CATTTAAAGAGTGCGTAATAGCTCACT 73 Query 474 AGTCGAG 480 |||||| Sbjct 72 GGTCGAG 66 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1684328735232