Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyphochytrium_20catenoides_20[genbank_20GCA_5F000327025.2_202011-11- 01] 311,983 sequences; 85,142,588 total letters Query= AAMG01002194.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value seq141961 95.1 2e-17 seq12922 87.8 3e-15 >seq141961 Length=188 Score = 95.1 bits (104), Expect = 2e-17 Identities = 91/114 (80%), Gaps = 2/114 (2%) Strand=Plus/Plus Query 139 CTGAATACATAGG-TATGCAAAGCGA-ACGCGGCGAACTGAAACATCTAAGTAGCTGCAG 196 |||||| |||||| |||| ||| | || ||| ||||||||||||||||||| | | || Sbjct 25 CTGAATTCATAGGATATGAGAAGGCAGACCCGGGGAACTGAAACATCTAAGTACCCGGAG 84 Query 197 GAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGGATGAGCC 250 ||| ||||| ||| | ||||||| ||||| ||||||||||| |||| |||| Sbjct 85 GAAGAGAAAGCAAATGCGATTCCCTGAGTAGCGGCGAGCGAAACGGGAACAGCC 138 >seq12922 Length=651 Score = 87.8 bits (96), Expect = 3e-15 Identities = 136/194 (70%), Gaps = 8/194 (4%) Strand=Plus/Plus Query 66 CGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGCCCT-- 123 |||||||| ||||| || ||||||| | | ||||||||||||||||| || | Sbjct 7 CGGGGAGTTGTCAAACGAGCTGTGATCCGAGGGTGTCCGAATGGGGAAACCCAGCACGAG 66 Query 124 -----TTGGGTCATTGCATGCTGAATACATAGG-TATGCAAAGCGAACGCGGCGAACTGA 177 | | || | | ||||||| ||||| | || | ||||| || ||| ||| Sbjct 67 TGATGTCGTGTTACCACCAGCTGAATGTATAGGCTGTGTGGGGGGAACGTGGGGAAGTGA 126 Query 178 AACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGA 237 ||||||| |||| | ||||| ||||| ||| | |||||| ||||||||||||||| Sbjct 127 AACATCTCAGTACCCATAGGAAGAGAAAACAATAGTGATTCCGTGAGTAGTGGCGAGCGA 186 Query 238 AATGGGATGAGCCT 251 || ||| ||| || Sbjct 187 AAGCGGAGGAGGCT 200 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915534748128