Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyphochytrium_20catenoides_20[genbank_20GCA_5F000327025.2_202011-11- 01] 311,983 sequences; 85,142,588 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq5072 313 8e-83 seq4440 145 2e-32 seq1076 143 9e-32 seq147506 127 7e-27 seq240073 120 1e-24 seq125126 82.4 2e-13 >seq5072 Length=251 Score = 313 bits (346), Expect = 8e-83 Identities = 176/178 (99%), Gaps = 0/178 (0%) Strand=Plus/Plus Query 356 GATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGAT 415 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 1 GATAGTAGATAGGGACAGTGGGAATCTCATTAATCCATTCATGCGCGTCACTAATTAGAT 60 Query 416 GACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTG 475 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 GACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTG 120 Query 476 GTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 GTTGAATTCCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 178 >seq4440 Length=332 Score = 145 bits (160), Expect = 2e-32 Identities = 98/110 (89%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| |||||| ||||||||||||||| |||| | |||||||||||||| ||||| Sbjct 227 CTTTTGTTCTACATGAGATTTCTGTTCTCATTGAGCTCACCTTAGGACACCTGTGTTATC 168 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATC 116 ||||||||||||||||||||||||||||||||||||||||| |||| || Sbjct 167 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACGTTGTCTTC 118 >seq1076 Length=109 Score = 143 bits (158), Expect = 9e-32 Identities = 97/108 (90%), Gaps = 2/108 (2%) Strand=Plus/Minus Query 213 GGTATTTCACTTGCGCCGAAACGGCTCCCACTTATTCTACACCTCTCAAGTCATTTCACA 272 |||||||||| || | || | ||||||||||||||||||||| ||||||||||||| Sbjct 109 GGTATTTCACCGTCGGCAAAGC--CTCCCACTTATTCTACACCTCATAAGTCATTTCACA 52 Query 273 AAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATT 320 | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 51 ACGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATT 4 >seq147506 Length=422 Score = 127 bits (140), Expect = 7e-27 Identities = 95/110 (86%), Gaps = 1/110 (1%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| |||||| ||||||||||||||| |||| | |||||||||||| | ||||| Sbjct 308 CTTTTGGTCTACATGAGATTTCTGTTCTCATTGAGCTCACCTTAGGACACCCGTGTTATC 249 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGAC-AATGTCAT 115 ||||||||| |||||||||||||||||||| ||| |||||| |||| ||| Sbjct 248 GTTTAACAGCTGTGCCGCCCCAGCCAAACTTCCCGCCTGACGAATGGCAT 199 >seq240073 Length=81 Score = 120 bits (132), Expect = 1e-24 Identities = 75/81 (93%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 315 CTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGT 374 |||||| |||||||||||||||||||||||| |||||| ||||||||||||||||||| Sbjct 1 CTGATTTTTCCAAGCCCGTTCCCTTGGCTGTGGGTTCGCTTGATAGTAGATAGGGACAGT 60 Query 375 GGGAATCTCGTTAATCCATTC 395 ||||||||| ||||||||||| Sbjct 61 GGGAATCTCATTAATCCATTC 81 >seq125126 Length=562 Score = 82.4 bits (90), Expect = 2e-13 Identities = 103/134 (77%), Gaps = 13/134 (10%) Strand=Plus/Plus Query 325 CAAGCCC-GTTCCCTT-GGCTGTGGTTTCGCTAGATAGTA---GATAGGGACAGTGGGAA 379 ||||| | |||||||| |||||||| ||||||| | |||| ||||| || ||||||| Sbjct 373 CAAGCTCTGTTCCCTTTGGCTGTGGGTTCGCTA-ACAGTAAAAGATAGA-ACTGTGGGAA 430 Query 380 TCTCGTTAAT---CCATTCATGCGCGTCACTAATT---AGATGACGAGGCATTTGGCTAC 433 |||| || | |||| || |||||||||||| | |||||||| | ||||||||| Sbjct 431 TCTCATTTTTGCTCCATCCACGCGCGTCACTAACTAGAAGATGACGGGATCTTTGGCTAC 490 Query 434 CTTAAGAGAGTCAT 447 ||| ||| ||||| Sbjct 491 CTTGTGAGGGTCAT 504 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1630098453984