Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyphochytrium_20catenoides_20[genbank_20GCA_5F000327025.2_202011-11- 01] 311,983 sequences; 85,142,588 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq131558 286 1e-74 seq93577 250 8e-64 seq190174 86.0 2e-14 seq274445 77.0 1e-11 >seq131558 Length=182 Score = 286 bits (316), Expect = 1e-74 Identities = 172/181 (95%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 253 CTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTCCCGGGGTCTTTTCG 312 |||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 2 CTACACAAACCGTACCGAACACCAATACCAAGCTATAGTGAAGGTCCCGGGGTCTTTTCG 61 Query 313 TCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCACCGGGCCTGTGGTTGA 372 |||||||||||| |||||||||||||||||||||||||||||| ||| | |||||||||| Sbjct 62 TCCTGCCGCGCGTAACGAGCATCTTTACTCGTACTGCAATTTCGCCGAGTCTGTGGTTGA 121 Query 373 GACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTC 432 |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 122 GACAGCAGAGAAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTC 181 Query 433 G 433 | Sbjct 182 G 182 >seq93577 Length=304 Score = 250 bits (276), Expect = 8e-64 Identities = 166/183 (91%), Gaps = 1/183 (1%) Strand=Plus/Plus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60 ||||| |||| ||||| |||||||||||||||||||||||||||||| |||||||||||| Sbjct 123 TCGACATGTACGTCTCACAGTCAAGCTCCCTTGTGCACTTACACTCAACACCTGATTGCC 182 Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120 |||||||||||||||||||||||||||||||||||| |||| ||| |||||||||||||| Sbjct 183 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACCTTTTAGGA-GGCAACCGCCCCAG 241 Query 121 TTAAACTACCCACCAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATATCCAC 180 |||||||||||||||||||||||||| | || ||||| || || |||||||| |||| Sbjct 242 TTAAACTACCCACCAGGCACTGTCCCTGAACCCGATCAGGGTCCGAGGTTAGAAGTCCAA 301 Query 181 TAC 183 ||| Sbjct 302 TAC 304 >seq190174 Length=329 Score = 86.0 bits (94), Expect = 2e-14 Identities = 81/103 (79%), Gaps = 4/103 (4%) Strand=Plus/Plus Query 462 GCCGTTTACTGGGGCTTCAATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCT 521 ||||||||||||||||| | || | || || | || | | || || ||||| Sbjct 1 GCCGTTTACTGGGGCTTAACTTCTCAGCTTCGCGGACGAA----TCCACTAACCGGTCCT 56 Query 522 CTTAACCTTCCAGCACCGGGCAGGCGTCAGTCCGTATACCTCG 564 ||||||||||||||||||||||||||||||||||||||| ||| Sbjct 57 CTTAACCTTCCAGCACCGGGCAGGCGTCAGTCCGTATACATCG 99 >seq274445 Length=81 Score = 77.0 bits (84), Expect = 1e-11 Identities = 53/60 (88%), Gaps = 0/60 (0%) Strand=Plus/Minus Query 419 CGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTT 478 |||||||||||||||||||||||||| || | |||||| |||||||||||||||| || Sbjct 81 CGACAAGGAATTTCGCTACCTTAGGACCGTCAGAGTTACATCCGCCGTTTACTGGGGGTT 22 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1697088801408