Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyphochytrium_20catenoides_20[genbank_20GCA_5F000327025.2_202011-11- 01] 311,983 sequences; 85,142,588 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq8846 237 1e-57 seq66070 91.5 1e-13 seq91063 84.2 2e-11 >seq8846 Length=717 Score = 237 bits (262), Expect = 1e-57 Identities = 389/557 (70%), Gaps = 4/557 (1%) Strand=Plus/Plus Query 66013 AGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCA 66072 ||| || |||||||| ||||| | ||||||||| || || ||||||| || || ||||| Sbjct 144 AGAAGCAAGGTTGCACACAGCGACCTCGTCAGGGGCAGTGTACTCGATGATCTCTGTGCA 203 Query 66073 CAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATC 66132 ||||| ||| | ||||| |||| ||||||||||||| || || ||||| || Sbjct 204 AAGATTGCTGGATTTGATGGTCCCCAGATTCTGTTGATTAGATTTCCGGTTGCAGTGGTC 263 Query 66133 CTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAG 66192 |||||||| |||||| || ||||| ||||||| ||||| || | ||| || ||| | Sbjct 264 CTTGTACAGCATGTAAGGGGTGCCAGTCTCAATCTGGGAATCTAGGATCGCAAACCA--G 321 Query 66193 AGC-GC-GTGCCTTCACCGTACGTACCGCCCTACCTTTGCGTTCGTAATGTTCGTAGAGG 66250 ||| || | ||||||||| | | ||| | |||| | || || | || || || Sbjct 322 AGCTGCTGAGCCTTCACCACCCTTCTTGCCTTTCCTTCTCTCTCATACTTCTCATAAAGA 381 Query 66251 TGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGC 66310 || || || ||||| || || | | | | | |||| || || || | ||| Sbjct 382 GCCTCAAACTCGTCTCCCCACACGTCAGGTAACCCTCGGCACTCGTTAGGGCAGAACAGA 441 Query 66311 GACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAG 66370 ||||| || || | | || ||| || ||| || || || || ||||| | |||||| Sbjct 442 GACCACTCGCCGTTCGCTTGTACGCGTTTCATGAAGAGGTCTGGAATCCACATAGCGTAG 501 Query 66371 AAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCA 66430 || | ||| | || || || ||| |||| ||||| || |||||| | ||||| Sbjct 502 AATAAATCTCTGGCGCGATGAAGTTCATTGCCATGATTCTTTTTCAAGTCCAAAAACTCG 561 Query 66431 AAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCA 66490 || |||||||||||||| || || ||||| || || || |||||| | || ||||| ||| Sbjct 562 AATATGTCGGCATGCCAAGGCTCAAGGTACATAGCAAATGAGCCCTTGCGCTTGCCTCCA 621 Query 66491 CCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTA 66550 || || || ||||| | ||| || ||||||||| | || ||| || || | || ||| Sbjct 622 CCCTGATCTACGTATCTAGCAGTATCGTTGAAGACCCTCAGCATAGGGACAATGCCATTA 681 Query 66551 GATTTGCCATTGGTGCC 66567 || | || |||||||| Sbjct 682 GAGGTTCCGTTGGTGCC 698 >seq66070 Length=901 Score = 91.5 bits (100), Expect = 1e-13 Identities = 308/468 (66%), Gaps = 14/468 (3%) Strand=Plus/Plus Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137 || || ||||||||||| |||| ||| || | | | ||| ||||||||||| ||| Sbjct 312 TCCACAGTGAACTGGATGGCATCAGCCTTCGGCCGCGAGCGAAGGTAGTACATGCCAGTC 371 Query 65138 TTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATA-ATTCGGCTC 65196 || || || ||| |||||||| ||||| || | | | |||| || ||| ||||| Sbjct 372 TTCAGTCCCTTCTTCCACGCATAGAAGTGCATGGAAG-TGAGCTTGCCTACATTAGGCTC 430 Query 65197 GGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCAT 65256 ||||| || ||||| | ||| || ||| ||| || || || || || ||||| Sbjct 431 GGCCATGTGAATATTAAGGCTCTGGCTTTGACAAATGAAAGCGCCTCGGTCAGCTGCCAT 490 Query 65257 GTCAATGATACGACGTCCCGAT--ATCTCCCAGACGGTCTTGTACAGGCGACGT-ACCTC 65313 || | ||| || | | | |||||||| |||||||| || | || | | | ||| Sbjct 491 ATCGA--GTACAACCTTTTGCTTGATCTCCCACACGGTCTTATAGA-GCTCCTTCAGCTC 547 Query 65314 AATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCAT 65373 ||||| ||| | | ||||| ||||| || |||||||| | || |||| Sbjct 548 CTGAGGAATGACCTTCACATTCTGGATGGAACCTCGGTCGGCAATAATCTGGTTCCGCAC 607 Query 65374 CGACTCTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATGAC-TT 65432 | | | ||| | |||| | | |||| || | ||||| || ||| | || | Sbjct 608 CTCCGGAGTCCAGAGCCCCATGGCAGTCAGATCATGGAGCAAGT-AC--TTGTTTACAAT 664 Query 65433 G--GAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGA 65490 | |||||| || | ||| || || || || |||||||| |||| || || | ||| Sbjct 665 GGTGAACTCTCCAGCCAGAACTCGGCGAGTGTACATGTTGGAGGTGAAAGGCTCGACGGA 724 Query 65491 TTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGC 65538 ||| |||| || | || ||||| || || || || ||||| || || Sbjct 725 CTCATTGTTACCAATGATCTGGGCGGTTGAAGCCGTCGGCATAGGTGC 772 >seq91063 Length=155 Score = 84.2 bits (92), Expect = 2e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 61273 GAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTC 61332 ||||| |||||| | |||||||| || |||||||||||||| |||||||| || || || Sbjct 149 GAGGTTCAAGTGCCAGAGGCGCGGTGCTTCTACGGCTTCCAAATTGCCATTGAAAACATC 90 Query 61333 CACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGA 61376 || || ||| ||||| || | ||||| || ||||| | ||| Sbjct 89 CATTCCGAGGTGTACTCGCTTTTGATCGACACCTACATTAAGGA 46 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396056330051120