Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyphochytrium_20catenoides_20[genbank_20GCA_5F000327025.2_202011-11- 01] 311,983 sequences; 85,142,588 total letters Query= NC_031108.1 Length=39640 Score E Sequences producing significant alignments: (Bits) Value seq70568 82.4 2e-11 >seq70568 Length=167 Score = 82.4 bits (90), Expect = 2e-11 Identities = 87/114 (76%), Gaps = 3/114 (3%) Strand=Plus/Minus Query 8887 GATGTAGTTGGTCAGGTTGCGGAACCCGAGTGCGGAGCCGCGCAGGTGTTCGAGCCGTCC 8946 |||||||| | | ||||||||||| ||||| ||| ||||| |||||||| | ||||| Sbjct 161 GATGTAGTGGTTGAGGTTGCGGAAGCCGAGCGCGATCCCGCGTAGGTGTTCCAAGCGTCC 102 Query 8947 GTTGAGCGCCTCGGTCGGCCCGTTGCTGGTGCCGGGTCGTTCGAAGTAGGCGAG 9000 ||||| ||| ||| ||| |||||| || |||| ||||||||||| || Sbjct 101 GTTGATCGCTTCGACCGGGCCGTTGGAGGCACCGG---TGTCGAAGTAGGCCAG 51 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 126256904270892