Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nannochloropsis_20gaditana_20[genbank_20GCA_5F000569095.1_202014-02- 18] 684 sequences; 27,589,342 total letters Query= AAMG01000150.1 Length=138 Score E Sequences producing significant alignments: (Bits) Value seq684 75.2 8e-12 >seq684 Length=114989 Score = 75.2 bits (82), Expect = 8e-12 Identities = 89/121 (74%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 18 TACGGTTACCTTGTTTCGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCCTCC 77 ||||| ||||||||| |||||||||| | |||| ||| | | | | | || ||| Sbjct 49455 TACGGCTACCTTGTTACGACTTCACCTCGGTCACTAATTTTACCTTCGGCATCTCCTTCC 49396 Query 78 CGAAGGTTAAGCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGGTGTGT 137 | ||||| | || | ||||| | ||||| || ||||||||||||||||||||||| Sbjct 49395 TCACGGTTAGGATAACGACTTCGGGTACAACCAGCTTCCATGGTGTGACGGGCGGTGTGT 49336 Query 138 A 138 | Sbjct 49335 A 49335 Score = 75.2 bits (82), Expect = 8e-12 Identities = 89/121 (74%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 18 TACGGTTACCTTGTTTCGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCCTCC 77 ||||| ||||||||| |||||||||| | |||| ||| | | | | | || ||| Sbjct 113355 TACGGCTACCTTGTTACGACTTCACCTCGGTCACTAATTTTACCTTCGGCATCTCCTTCC 113414 Query 78 CGAAGGTTAAGCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGGTGTGT 137 | ||||| | || | ||||| | ||||| || ||||||||||||||||||||||| Sbjct 113415 TCACGGTTAGGATAACGACTTCGGGTACAACCAGCTTCCATGGTGTGACGGGCGGTGTGT 113474 Query 138 A 138 | Sbjct 113475 A 113475 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 345597783840