Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nannochloropsis_20gaditana_20[genbank_20GCA_5F000569095.1_202014-02- 18] 684 sequences; 27,589,342 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq23 282 8e-74 >seq23 Length=719191 Score = 282 bits (312), Expect = 8e-74 Identities = 219/258 (85%), Gaps = 2/258 (1%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGCTCAAG-CCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 ||||||||||||||| ||||| | || |||| ||||||| | |||||||||||||||||| Sbjct 351349 CTTCTTAGAGGGACTTTCGGCGCTAGGCCGAAGGAAGTTGGGGGCAATAACAGGTCTGTG 351408 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||| ||||||||||||||||||||||||| ||||||||| || | Sbjct 351409 ATGCCCTTAGATGTCCTGGGCCGCACGCGCGCTACACTGATGCGTTCAACGAGTTTATAA 351468 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 ||||| |||||||| | ||||||||||| | | | ||||| | |||||||| |||| Sbjct 351469 CCTTGTCCGGAAGGACCGGGTAATCTTGAAATGCGC-ATCGTGATAGGGATAGATTATTG 351527 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 ||| |||| |||| |||||||||| |||||||| |||| ||||||||| ||| |||||| Sbjct 351528 CAACTATTAATCTTGAACGAGGAATTCCTAGTAAACGCGAGTCATCAGCTCGCATTGATT 351587 Query 311 ACGTCCCTGCCCTTTGTA 328 |||||||||||||||||| Sbjct 351588 ACGTCCCTGCCCTTTGTA 351605 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947193521152