Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nannochloropsis_20gaditana_20[genbank_20GCA_5F001614215.1_202016-04- 08] 6,860 sequences; 25,618,953 total letters Query= AAMG01000140.1 Length=336 Score E Sequences producing significant alignments: (Bits) Value seq4379 78.8 2e-12 >seq4379 Length=14604 Score = 78.8 bits (86), Expect = 2e-12 Identities = 104/144 (72%), Gaps = 3/144 (2%) Strand=Plus/Minus Query 194 ACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAG---TCGCGGTAACGCGTGATGG 250 || |||||| |||||||| | | || ||||||||| | || ||| ||| Sbjct 8040 ACCCGAAACTAAGTGATCTAACTATGAACAGGTTGAAAATTTAATGGAAACATTAATTGG 7981 Query 251 AGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGGC 310 |||||||||| || | |||||||| | | |||||| | | || |||||||||||||| Sbjct 7980 AGGACCGAACTCGTGTATGTTGAAAAATACTGGGATGATTTGTGGTTAGGGGTGAAAGGC 7921 Query 311 CAATCAAACTGGGAAATAGCTCGT 334 ||||||||| || |||||| || Sbjct 7920 TAATCAAACTTAGAGATAGCTGGT 7897 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 972733265920