Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nannochloropsis_20gaditana_20[genbank_20GCA_5F001614215.1_202016-04- 08] 6,860 sequences; 25,618,953 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq274 129 3e-28 >seq274 Length=21802 Score = 129 bits (142), Expect = 3e-28 Identities = 102/120 (85%), Gaps = 8/120 (7%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTC---AAAATGATAACATCG 57 ||||||||||||||||||||||| ||||||||||| ||| | |||||| || | Sbjct 987 GAACCCAAAGACTTTGATTTCTCATAAGGTGCCGAT-GAGGCCTAAAAATG----CACCC 1041 Query 58 CCCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||||||||||||||||||| |||||||||||||| ||||||| ||| ||||||| Sbjct 1042 ACCGATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGATGGTATCTAATCATCTTCGA 1101 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278382095400