Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nannochloropsis_20gaditana_20[genbank_20GCA_5F001614215.1_202016-04- 08] 6,860 sequences; 25,618,953 total letters Query= AAMG01001178.1 Length=367 Score E Sequences producing significant alignments: (Bits) Value seq2348 210 5e-52 >seq2348 Length=90098 Score = 210 bits (232), Expect = 5e-52 Identities = 147/166 (89%), Gaps = 1/166 (1%) Strand=Plus/Minus Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88 ||||||| |||| || |||||||||||||||||| || ||||| |||||||||||| Sbjct 43449 CACGCGGTATTG-CTCTGTCAGGCTTTCGCCCATTGCAGAAAATTCCTCACTGCTGCCTC 43391 Query 89 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTT 148 |||||||||||||||||||||||||||||||||||| |||||| |||||||||||||| | Sbjct 43390 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCTGATCGTCCTCTCAGACCAGCT 43331 Query 149 ACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATC 194 || ||||||||||||||| ||| ||||| ||||||||||||||| Sbjct 43330 ACTGATCGTCGCCTTGGTAGGCCTTTACCCTACCAACTAGCTAATC 43285 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1071926460800