Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nannochloropsis_20limnetica_20[genbank_20GCA_5F001614225.1_202016- 04-08] 23,791 sequences; 33,508,916 total letters Query= AAMG01000140.1 Length=336 Score E Sequences producing significant alignments: (Bits) Value seq83 78.8 2e-12 >seq83 Length=1542 Score = 78.8 bits (86), Expect = 2e-12 Identities = 104/144 (72%), Gaps = 3/144 (2%) Strand=Plus/Minus Query 194 ACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAG---TCGCGGTAACGCGTGATGG 250 || |||||| |||||||| ||| || ||||||||| | || ||| ||| Sbjct 741 ACCCGAAACTAAGTGATCTAACCATGAACAGGTTGAAAATTTGATGGAAACATCAATTGG 682 Query 251 AGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGGC 310 |||||||||| || | |||||| | | | |||||| | | || |||||||||||||| Sbjct 681 AGGACCGAACTCGTGTATGTTGAAGAATACTGGGATGATTTGTGGTTAGGGGTGAAAGGC 622 Query 311 CAATCAAACTGGGAAATAGCTCGT 334 ||||||||| || |||||| || Sbjct 621 TAATCAAACTTAGATATAGCTGGT 598 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 972568561152