Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nannochloropsis_20limnetica_20[genbank_20GCA_5F001614225.1_202016- 04-08] 23,791 sequences; 33,508,916 total letters Query= AAMG01000750.1 Length=102 Score E Sequences producing significant alignments: (Bits) Value seq6522 80.6 1e-13 seq442 71.6 6e-11 >seq6522 Length=4128 Score = 80.6 bits (88), Expect = 1e-13 Identities = 52/57 (91%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCA 57 ||||||||||||||||||||||||| |||||||||||||||| ||||||||| || Sbjct 444 GGAAAAGAAACTAACCAGGATTCCCCTAGTAACGGCGAGTGAAGCGGGAAGAGCTCA 388 >seq442 Length=752 Score = 71.6 bits (78), Expect = 6e-11 Identities = 47/52 (90%), Gaps = 0/52 (0%) Strand=Plus/Minus Query 6 AGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCA 57 |||||||||||||||||||| |||||||||||||||| ||||||||| || Sbjct 752 AGAAACTAACCAGGATTCCCCTAGTAACGGCGAGTGAAGCGGGAAGAGCTCA 701 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 230348611440