Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nannochloropsis_20limnetica_20[genbank_20GCA_5F001614225.1_202016-
04-08] 23,791 sequences; 33,508,916 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq17 354 1e-95
>seq17
Length=466
Score = 354 bits (392), Expect = 1e-95
Identities = 237/263 (90%), Gaps = 1/263 (0%)
Strand=Plus/Plus
Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 36 TCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTG 95
Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150
|||||||||||||||||| || ||| || |||||| | |||||||||||||||||
Sbjct 96 TTAGTGGGTGAACAATCCTACACTTGGTGACTTCTGCGACACAATGATAGGAAGAGCCGA 155
Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 156 CATCGAAGAATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 215
Query 211 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGG 270
||||||||||||||||| ||||||||| || ||| ||| | |||||||||||||||||
Sbjct 216 CTGTGGTAACTTTTCTGACACCTCTAG-CTTAAAATTCTAAAAACTAAAGGATCGATAGG 274
Query 271 CCACACTTTCATGGTTTGTATTC 293
||| |||||| ||||||||||
Sbjct 275 CCATGCTTTCACAGTTTGTATTC 297
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 854196729696
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |