Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nannochloropsis_20limnetica_20[genbank_20GCA_5F001614225.1_202016- 04-08] 23,791 sequences; 33,508,916 total letters Query= AAMG01001138.1 Length=202 Score E Sequences producing significant alignments: (Bits) Value seq47 111 2e-22 >seq47 Length=642 Score = 111 bits (122), Expect = 2e-22 Identities = 102/133 (77%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 |||||||| |||| | ||||||| |||||| ||| |||| | |||||||||||| Sbjct 510 GGGTCTTTCCGTCTAGCTGTAGGTAATCTGCATCTGCACAGATATTTCAATTTCACTGAA 569 Query 85 CTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCGA 144 | | ||| ||||||| |||||||||| ||||||||||||||||||||| Sbjct 570 TTTATGGTAGAGACAGCGGGGAAGTCGTTACACCATTCATGCAGGTCGGAACTTACCCGA 629 Query 145 CAAGGAATTTCGC 157 ||||||||||||| Sbjct 630 CAAGGAATTTCGC 642 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547073883909