Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nannochloropsis_20limnetica_20[genbank_20GCA_5F001614225.1_202016- 04-08] 23,791 sequences; 33,508,916 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq1150 102 1e-19 >seq1150 Length=214 Score = 102 bits (112), Expect = 1e-19 Identities = 65/71 (92%), Gaps = 0/71 (0%) Strand=Plus/Minus Query 48 CTGACCAGGCAGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTC 107 |||| ||| ||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct 212 CTGAACAGCCAGTGCCGCGAAGCTACCATCTGTGGGATTATGACTGAACGCCTCTAAGTC 153 Query 108 AGAATCCATGC 118 ||||||| ||| Sbjct 152 AGAATCCTTGC 142 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819011194624