Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nannochloropsis_20limnetica_20[genbank_20GCA_5F001614225.1_202016- 04-08] 23,791 sequences; 33,508,916 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq22075 107 8e-18 >seq22075 Length=10782 Score = 107 bits (118), Expect = 8e-18 Identities = 176/251 (70%), Gaps = 7/251 (3%) Strand=Plus/Plus Query 351031 GTTGGAGGCCACGTCCATGAGGGTGGCTCCGTCGGCGCGCGCGGCCAGATCCTGCACGGC 351090 |||||||| ||| ||||||||||||| | |||||||| || || | ||| ||| Sbjct 4273 GTTGGAGGTGACGCCCATGAGGGTGGCGGCCTCGGCGCGGGCCTCCTCAGTCTGG--GGC 4330 Query 351091 --GTGGCCGTTGGTCTCGTCTCCGTCAAAGTCGGCGTTGTAGGGCTGGGTGACCGACGGG 351148 ||| ||| ||||||| ||||| |||||||||||||||||| | ||| || | Sbjct 4331 AGGTGCATGTTCATCTCGTCCCCGTCGAAGTCGGCGTTGTAGGGCGCGCAGACGCACTCG 4390 Query 351149 TTGATGCCGATGGTGTAGCCCCGCGGGTTGCGCCTCACGCGGTGCACCATGATGGACCCG 351208 |||| || || ||| || || || || | | |||||||| |||||||||| Sbjct 4391 TTGAAGCGGAAGGT---GCGCCAGGGCATGACCTTGACGCGGTGGGCCATGATGGAGAGC 4447 Query 351209 TTGTGGAGCGTGGGCTGGCGATTGTGGATGATGATGTCGCCATCGCGCAAGTGCCTCTCC 351268 ||||| | | |||||| || ||| || || ||||||| || || ||||| |||| Sbjct 4448 TTGTGCAAAGAGGGCTGCCGGTTGAAGAGGACGATGTCGTTGTCCACCATGTGCCGCTCC 4507 Query 351269 ACCTTGTCGCC 351279 ||| ||| || Sbjct 4508 ACCACGTCCCC 4518 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084088225852218