Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nannochloropsis_20limnetica_20[genbank_20GCA_5F001614225.1_202016- 04-08] 23,791 sequences; 33,508,916 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq4065 86.0 2e-11 >seq4065 Length=6907 Score = 86.0 bits (94), Expect = 2e-11 Identities = 107/144 (74%), Gaps = 2/144 (1%) Strand=Plus/Plus Query 159431 AACTTTGGAATAATCTTTTCTGGATACTGGTAAGGACCGTAGACATTGTTACAACGGGTG 159490 ||||| || || ||||||||||| ||||||| || || ||||| ||||| | ||| ||| Sbjct 3387 AACTTGGGGATGATCTTTTCTGGGTACTGGTGTGGGCCATAGACGTTGTTGCCACGCGTG 3446 Query 159491 ATGATTACGGGAAGAGAGAAGGAGAGACGATAAGAAC-TGGCCAAGAGTTCTGCTCCTGC 159549 ||||| | || | ||| ||| | || ||||| |||| | || ||| || || || Sbjct 3447 ATGATGAGAGGGACGTTGAAAGAGCG-GGAATAGAACTTGGCGATGAATTCGGCACCGGC 3505 Query 159550 CTTGCTGGCCGCATAAGGGTTAGT 159573 |||| |||| |||||||| | ||| Sbjct 3506 CTTGGTGGCAGCATAAGGATAAGT 3529 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884311844804363