Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nannochloropsis_20oceanica_20[genbank_20GCA_5F000226695.1_202011-09- 29] 5,851 sequences; 27,639,860 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq4642 125 4e-27 >seq4642 Length=1491 Score = 125 bits (138), Expect = 4e-27 Identities = 100/119 (84%), Gaps = 6/119 (5%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTC--AAAATGATAACATCGC 58 ||||||||||||||||||||||| ||||||||||| | | | | |||| || | Sbjct 1053 GAACCCAAAGACTTTGATTTCTCATAAGGTGCCGATGGGGCCTTACAATG----CACCCA 1108 Query 59 CCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||||||||||||||||||| |||||||||||||| ||||||| ||| ||||||| Sbjct 1109 CCGATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGATGGTATCTAATCATCTTCGA 1167 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278384728890