Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nannochloropsis_20oceanica_20[genbank_20GCA_5F000226695.1_202011-09- 29] 5,851 sequences; 27,639,860 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq4642 275 1e-71 >seq4642 Length=1491 Score = 275 bits (304), Expect = 1e-71 Identities = 211/248 (85%), Gaps = 8/248 (3%) Strand=Plus/Plus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct 681 TCAGTGTAGCGCGCGTGCGGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTGCCCC 740 Query 76 AAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCA---GCCA--CCAACCAT 130 ||||||| | ||| ||| | ||||||||||||||| | || | | || ||| Sbjct 741 CAACTTCCTTCGGCCTAGCGCCGAAAGTCCCTCTAAGAAGTCTCTGGCAATGCTAAGCAT 800 Query 131 AGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAA 190 | | |||||||||||| |||||||||||||| |||||||||||||||||| Sbjct 801 TCCCAGTA---CTATTTAGCAGGCGGGGGTCTCGTTCGTTAACGGAATTAACCAGACAAA 857 Query 191 TCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATC 250 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 858 TCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTCTC 917 Query 251 AATCTGTC 258 |||||||| Sbjct 918 AATCTGTC 925 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796754836131