Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peronospora_20effusa_20[genbank_20GCA_5F002245715.1_202017-08-10] 4,061 sequences; 25,220,599 total letters Query= AAMG01000383.1 Length=435 Score E Sequences producing significant alignments: (Bits) Value seq1630 111 4e-22 >seq1630 Length=32053 Score = 111 bits (122), Expect = 4e-22 Identities = 232/340 (68%), Gaps = 8/340 (2%) Strand=Plus/Minus Query 3 TACCTGAAGAATAAGCACCGGCTAACTAC--GTGCCAGCAGCCGCGGTAATACGTAGGGT 60 ||| | || || ||| |||||||| ||| ||||||||||||||||||||||| || Sbjct 11780 TACTTAAAAAAGAAGTTCCGGCTAA-TACCCGTGCCAGCAGCCGCGGTAATACGGGAGGA 11722 Query 61 GCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGAC--AG 118 || ||| ||| |||| || | | ||||||||| || | ||| |||| | |||| | Sbjct 11721 GCGAGCATTATTCGGGATGATTAGGCGTAAAGAGTTTGTAGGTGGTTTTTTAAGTTGAAA 11662 Query 119 GTGTGAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGT 178 | |||| | |||||| | || | || |||| ||| |||| | Sbjct 11661 GAAACAAATTAAAG--CTTAACTTTATAAATTTTTTCAAAACTGATAAACTTGAGTATAA 11604 Query 179 C-AGAGGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACC 237 ||||| ||||||| | || || | |||| ||| |||| | ||||| ||| Sbjct 11603 ATAGAGGATAATGGAATTTCTATTGGAGTGATAAAATACGTTGATAATAGAAGGAAGACC 11544 Query 238 AATGGCGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCA 297 |||||||||||| ||||| | |||||| || | |||||||| |||| ||| Sbjct 11543 TATGGCGAAGGCAATTATCTGGGTATATACTGACACTGAGAAACGAAAGCTTGGGTAGCG 11484 Query 298 AACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGAT 337 ||| |||||||| |||| ||||||||| || |||||||| Sbjct 11483 AACGGGATTAGAGACCCCGGTAGTCCATGCTGTAAACGAT 11444 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1289547629344