Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peronospora_20effusa_20[genbank_20GCA_5F002245715.1_202017-08-10] 4,061 sequences; 25,220,599 total letters Query= AAMG01001432.1 Length=344 Score E Sequences producing significant alignments: (Bits) Value seq1630 109 1e-21 >seq1630 Length=32053 Score = 109 bits (120), Expect = 1e-21 Identities = 140/189 (74%), Gaps = 3/189 (2%) Strand=Plus/Plus Query 7 GCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCT 66 |||| |||| | |||| | |||||| ||| || |||||||||||||| | ||| | Sbjct 11847 GCTGGATCAAGCTTTCGCTCATTGTCCAAAATTCCCCACTGCTGCCTTTAAAAA-AGTTT 11905 Query 67 GGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGG 126 |||||||||||||||||||||||||| | ||| || ||| | |||| ||| | || Sbjct 11906 GGGCCGTGTCTCAGTCCCAATGTGGCTGATCATTCTTTCAAATCAGCTAAAGATAATAGG 11965 Query 127 CTTGGTGGGCTATTATCTCACCAACTACC-TAATCGGCCGCGAGCCCATCTTTCAGCGAT 185 |||||| | || ||| |||||||||| ||||| ||| | | ||||||| | || | Sbjct 11966 CTTGGTAGTCTTTTAAACTACCAACTACCATAATCTTGCGCAAACTCATCTTTTAACGTT 12025 Query 186 A-AATCTTT 193 | || |||| Sbjct 12026 ACAAACTTT 12034 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 998359454976