Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peronospora_20effusa_20[genbank_20GCA_5F002245725.1_202017-08-10] 4,387 sequences; 23,992,579 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq4219 109 3e-22 >seq4219 Length=2042 Score = 109 bits (120), Expect = 3e-22 Identities = 96/119 (81%), Gaps = 2/119 (2%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAA--AATGATAACATCGC 58 ||||||||||||||||||||||| || ||||| || |||| || | ||| | Sbjct 96 GAACCCAAAGACTTTGATTTCTCATACGGTGCTGACAAGGTCATTTAAAGTAAACGACTG 155 Query 59 CCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 || ||||| ||||||||||||||| |||||||||||||| ||||||| ||| ||||||| Sbjct 156 CCAATCCCGAGTCGGCATAGTTTATGGTTAAGACTACGATGGTATCTAATCATCTTCGA 214 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278388549930