Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peronospora_20effusa_20[genbank_20GCA_5F002245725.1_202017-08-10] 4,387 sequences; 23,992,579 total letters Query= AAMG01001178.1 Length=367 Score E Sequences producing significant alignments: (Bits) Value seq1078 118 2e-24 >seq1078 Length=24344 Score = 118 bits (130), Expect = 2e-24 Identities = 149/197 (76%), Gaps = 7/197 (4%) Strand=Plus/Minus Query 1 CTTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCC 60 |||||||| | | | | || |||| ||| ||| |||| |||||||| |||||||| | Sbjct 20244 CTTTACAACCTAATTAGCCTCCATCACTCACTCGGTATTG-CTGGATCAAGCTTTCGCTC 20186 Query 61 ATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAG 120 ||||||||| ||||||||||||||||| | ||| ||| |||||||||||| ||| Sbjct 20185 ATTGTCCAAAATTCCCCACTGCTGCCT-TTAAAAAAGTTTGGGCCGTGTCTCAGTCCCAA 20127 Query 121 TGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATT--ACCT 178 |||| |||||||| || ||| | ||| || ||| | | |||||| || | || | || Sbjct 20126 TGTGGCTGATCATTCTTTCAAATCAGCTAAAGATAATAGGCTTGGT-AGTCTTTTAAACT 20068 Query 179 CACCAACTAGC-TAATC 194 |||||||| | ||||| Sbjct 20067 -ACCAACTACCATAATC 20052 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1071952971360