Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peronospora_20effusa_20[genbank_20GCA_5F002245735.1_202017-08-10] 4,020 sequences; 24,880,192 total letters Query= AAMG01002175.1 Length=414 Score E Sequences producing significant alignments: (Bits) Value seq3916 109 1e-21 >seq3916 Length=40521 Score = 109 bits (120), Expect = 1e-21 Identities = 143/194 (74%), Gaps = 3/194 (2%) Strand=Plus/Plus Query 4 CTTTACAACCCGAAG-GCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCA 62 |||||||||| | |||| | ||| ||| ||| || |||| |||| |||| ||| || Sbjct 20277 CTTTACAACCTAATTAGCCTCCATCACTCACTCGGTATTGCTGGATCAAGCTTTCGCTCA 20336 Query 63 TTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGT 122 |||| ||| ||||||||||||||||| | ||| ||| |||||||||||| ||| | Sbjct 20337 TTGTCCAAAATTCCCCACTGCTGCCT-TTAAAAAAGTTTGGGCCGTGTCTCAGTCCCAAT 20395 Query 123 GTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGC 182 ||||||| |||| || ||| | |||||| ||| | | || ||| | | ||| | | Sbjct 20396 GTGGCTGATCATTCTTTCAAATCAGCTAAAGATAATAGGCTTGGTAGTCTTTTAAACTAC 20455 Query 183 CAACTAGC-TAATC 195 |||||| | ||||| Sbjct 20456 CAACTACCATAATC 20469 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1222350859520