Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peronospora_20effusa_20[genbank_20GCA_5F002245735.1_202017-08-10] 4,020 sequences; 24,880,192 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq3916 187 8e-45 >seq3916 Length=40521 Score = 187 bits (206), Expect = 8e-45 Identities = 336/490 (69%), Gaps = 32/490 (7%) Strand=Plus/Plus Query 76 ACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAGTTAAACTACCCACCA 135 ||||||| | |||||||||| ||| ||||| | |||||||||| |||||||| |||| Sbjct 23117 ACCTTTGTACACCTCCGTTACTCTTTAGGAGGTGA-CCGCCCCAGTCAAACTACCAACCA 23175 Query 136 GGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATATCCACTACGGTCAGAGTGGT 195 ||||||| | ||| || |||| ||| | | | |||||||| Sbjct 23176 TACACTGTCT-------ATTTCAAAA---AATATTAGTTATTTATTTTAATAAGAGTGGT 23225 Query 196 ATTTCAACAACGACTCCACAACC-ACTAGCGTGGCCGCATCATAGTCTCCCACCTATCCT 254 ||||||| | || |||| |||||||| | | | | | |||| ||| || Sbjct 23226 ATTTCAAAGATATCTAAACAATTTACTAGCGTAAAGGTCTAAACGATTACCACTTATTCT 23285 Query 255 ACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTCC-CGGGGTCTTTTCGT 313 ||||| | | ||| ||||| ||| | |||| ||||| | |||||||||| ||| Sbjct 23286 ACACATATTATATAAAATAACAATATAAAGATGTAGTAAAGGTTCACGGGGTCTTTCCGT 23345 Query 314 CCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCACCGGGCCTGTGGTTGAG 373 | | ||| ||||||| || || | ||| ||||| | | || | | ||| Sbjct 23346 CTAACTATAGAAAATCCGCATCTTCACGGATAATTCAAATTCACTGAGTCTATATTGGAG 23405 Query 374 ACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCG 433 ||||| ||| |||||||| |||||| ||||||||||||||||||||||||||||||||| Sbjct 23406 ACAGCGGGGATGTCGTTACACCATTCATGCAGGTCGGAACTTACCCGACAAGGAATTTCG 23465 Query 434 CTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTTCAATTACCCGCCTCA 493 ||||||||||| || | |||||| ||||||||||||||| |||| ||| || | | Sbjct 23466 CTACCTTAGGACCGTCAGAGTTACGGCCGCCGTTTACTGGGACTTCCATTTAATGCGT-A 23524 Query 494 CACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCAGCACCGGGCAGGCGTCAGTC 553 ||| | |||| || | |||||||||||||||||| ||||| | Sbjct 23525 AACATC------------------TCCTTTTTATCTTCCAGCACCGGGCAGGTGTCAGAC 23566 Query 554 CGTATACCTC 563 | ||||| || Sbjct 23567 CCTATACATC 23576 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1702331563520