Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peronospora_20tabacina_20[genbank_20GCA_5F002099245.1_202017-04-18] 4,015 sequences; 63,065,868 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq147 93.3 1e-16 seq2856 80.6 8e-13 seq2745 77.0 1e-11 >seq147 Length=123988 Score = 93.3 bits (102), Expect = 1e-16 Identities = 63/71 (89%), Gaps = 0/71 (0%) Strand=Plus/Plus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 ||||| |||||| |||||| ||||||||||||||||| | ||||||||||||||||| Sbjct 44275 TACGATCGCAAGATTGAAATTCAAAGGAATTGACGGGAGTCTACACAAGCGGTGGAGCAT 44334 Query 61 GTGGTTTAATT 71 ||||||||||| Sbjct 44335 GTGGTTTAATT 44345 >seq2856 Length=47328 Score = 80.6 bits (88), Expect = 8e-13 Identities = 65/79 (82%), Gaps = 0/79 (0%) Strand=Plus/Plus Query 410 AGTTCGGATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGAT 469 |||||||||| | ||| |||||| | ||| ||| |||||||||||||||||| ||| Sbjct 19603 AGTTCGGATTAAGGGCTGAAACTCGCCCTTATAAAGTTGGAATCGCTAGTAATCGCAGAA 19662 Query 470 CAGCATGCTACGGTGAATA 488 ||||||| | ||||||||| Sbjct 19663 CAGCATGTTGCGGTGAATA 19681 >seq2745 Length=48123 Score = 77.0 bits (84), Expect = 1e-11 Identities = 54/62 (87%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 431 CTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGCATGCTACGGTGAATACG 490 |||| | |||||||| |||||||||||||||||| ||| ||||||| | ||||||||| | Sbjct 2814 CTCGCCCATATGAAGTTGGAATCGCTAGTAATCGCAGAACAGCATGTTGCGGTGAATATG 2873 Query 491 TT 492 || Sbjct 2874 TT 2875 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503939614400