Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peronospora_20tabacina_20[genbank_20GCA_5F002099245.1_202017-04-18] 4,015 sequences; 63,065,868 total letters Query= AAMG01001432.1 Length=344 Score E Sequences producing significant alignments: (Bits) Value seq147 82.4 2e-13 seq2167 73.4 8e-11 >seq147 Length=123988 Score = 82.4 bits (90), Expect = 2e-13 Identities = 79/100 (79%), Gaps = 1/100 (1%) Strand=Plus/Minus Query 7 GCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCT 66 |||| |||| | |||| | |||||| ||| || |||||||||||||| | ||| | Sbjct 44443 GCTGGATCAAGCTTTCGCTCATTGTCCAAAATTCCCCACTGCTGCCTTTAAAAA-AGTTT 44385 Query 67 GGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCA 106 |||||||||||||||||||||||||| | ||| || ||| Sbjct 44384 GGGCCGTGTCTCAGTCCCAATGTGGCTGATCATTCTTTCA 44345 >seq2167 Length=55589 Score = 73.4 bits (80), Expect = 8e-11 Identities = 72/92 (78%), Gaps = 2/92 (2%) Strand=Plus/Plus Query 7 GCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCT 66 |||| |||| | |||| | |||||| ||| | |||||||||||||| | ||| | Sbjct 42278 GCTGAATCAAGCTTTCGCTCATTGTCCAAAAATCCCCACTGCTGCCTTTAAAA--AGTTT 42335 Query 67 GGGCCGTGTCTCAGTCCCAATGTGGCCGTTCA 98 |||| ||||||||||||||||||||| | ||| Sbjct 42336 GGGCAGTGTCTCAGTCCCAATGTGGCTGATCA 42367 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 998359914240