Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peronospora_20tabacina_20[genbank_20GCA_5F002099245.1_202017-04-18] 4,015 sequences; 63,065,868 total letters Query= AAMG01001693.1 Length=610 Score E Sequences producing significant alignments: (Bits) Value seq686 706 0.0 seq387 82.4 3e-13 >seq686 Length=3192 Score = 706 bits (782), Expect = 0.0 Identities = 475/528 (90%), Gaps = 7/528 (1%) Strand=Plus/Plus Query 1 CGATGCTCCCACACCCACCCCGGTGTGGTGCGGCGACCTCCCCTACATCTGGGCCCATGG 60 ||||| ||| |||||| || |||||||||||||||| || |||||||||||||||| || Sbjct 2110 CGATGTTCCGGCACCCAACCAGGTGTGGTGCGGCGACATCACCTACATCTGGGCCCAGGG 2169 Query 61 GAAATGGCATTACCTGGCTGTCGCGCTGGATCTTTGCTCGCGCCGGGTGGTGGCTTGGGC 120 ||||||||||||||||||||||| ||||||||||||| | |||||||| |||| ||||| Sbjct 2170 GAAATGGCATTACCTGGCTGTCGTGCTGGATCTTTGCACACGCCGGGTAGTGGGCTGGGC 2229 Query 121 GTTGACCAGACACCCCGGACGCCGATCTGGCTATGCGGGCGCTGGATATGGCTTACCAGC 180 |||| | || | |||||||||||||||| ||| ||||||||||||||||||| ||| Sbjct 2230 GTTGTCG-GAAAAGCCGGACGCCGATCTGGTTATCAAGGCGCTGGATATGGCTTACGAGC 2288 Query 181 CTGCACGACG---ACCTCATGGTCTGCTGGTTCACTCGGATCAAGGGTCGCAGTATGCGA 237 |||| | |||||| || |||||| ||||||||||||||||||| |||||||||| Sbjct 2289 ---AACGAGGCAAACCTCAAGGCCTGCTGTTTCACTCGGATCAAGGGTCACAGTATGCGA 2345 Query 238 GTCGTTTATTTCGCCAGCGGCTGTGGCGTTATCGCATGCGCCAGAGCATGAGTCGCCGGG 297 ||||| |||||||||||||||||||||||||||| ||||||||||||||||| || |||| Sbjct 2346 GTCGTCTATTTCGCCAGCGGCTGTGGCGTTATCGGATGCGCCAGAGCATGAGCCGGCGGG 2405 Query 298 GAAATTGCTGGGACAATGCGCCAATGGAGCGCGTGTTCCGCAGCTTGAAAACGGAGTGGA 357 |||||||||||||||| |||||||||||||||||||| ||||||||||||||||| |||| Sbjct 2406 GAAATTGCTGGGACAACGCGCCAATGGAGCGCGTGTTTCGCAGCTTGAAAACGGAATGGA 2465 Query 358 TACCGACCACGGGTTACCGAACGGCTCAAGAAGCCCAGCGCGATATCAGCCAATTCTTAA 417 ||||||||||||||||| ||||||||||||||||||||||||||||||| || ||||| | Sbjct 2466 TACCGACCACGGGTTACAGAACGGCTCAAGAAGCCCAGCGCGATATCAGTCACTTCTTGA 2525 Query 418 TGCATCGGTACAACTGGATTCGCCCCCATCGATTCAACGGTGGGCTGGCGCCAGCTCGGG 477 |||||| |||||||||| |||| ||||||| ||||||||||||| ||||||||||||||| Sbjct 2526 TGCATCAGTACAACTGGGTTCGACCCCATCAATTCAACGGTGGGTTGGCGCCAGCTCGGG 2585 Query 478 CCGAAGAAAAACTTAACGTCGTGTCCGGGATTAGTTGACCACTACAGA 525 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2586 CCGAAGAAAAACTTAACGTCGTGTCCGGGATTAGTTGACCACTACAGA 2633 >seq387 Length=5930 Score = 82.4 bits (90), Expect = 3e-13 Identities = 68/83 (82%), Gaps = 0/83 (0%) Strand=Plus/Plus Query 441 CCCCATCGATTCAACGGTGGGCTGGCGCCAGCTCGGGCCGAAGAAAAACTTAACGTCGTG 500 || |||| |||||| | ||||| | || |||||| |||| ||||||||||||| || ||| Sbjct 1405 CCACATCAATTCAATGATGGGCAGCCGTCAGCTCAGGCCTAAGAAAAACTTAATGTGGTG 1464 Query 501 TCCGGGATTAGTTGACCACTACA 523 ||| |||||||| ||| ||||| Sbjct 1465 TCCAAGATTAGTTAACCGCTACA 1487 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1846323550385