Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20agathidicida_20[genbank_20GCA_5F001314435.1_202015- 10-14] 3,701 sequences; 37,340,450 total letters Query= AAMG01000383.1 Length=435 Score E Sequences producing significant alignments: (Bits) Value seq133 109 1e-21 >seq133 Length=36881 Score = 109 bits (120), Expect = 1e-21 Identities = 232/342 (68%), Gaps = 12/342 (4%) Strand=Plus/Minus Query 3 TACCTGAAGAATAAGCACCGGCTAACTAC--GTGCCAGCAGCCGCGGTAATACGTAGGGT 60 ||| | || || ||| |||||||| ||| ||||||||||||||||||||||| || Sbjct 24985 TACTTAAAAAAGAAGTTCCGGCTAA-TACCCGTGCCAGCAGCCGCGGTAATACGGGAGGA 24927 Query 61 GCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGT 120 || ||| ||| ||||||| | | ||||||||| || | ||| |||| | |||| | Sbjct 24926 GCGAGCATTATTCGGAATGATTAGGCGTAAAGGGTTTGTAGGTGGTTTTTTAAGT----T 24871 Query 121 GTGAAATCCCCGG----GCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGT 176 | ||| | ||| ||| | | | || |||| |||||||| | Sbjct 24870 GAAAAAAACAAATTAAAGCTCAACTTTATATATTTTTTCAAAACTGATAAACTAGAGTAT 24811 Query 177 GTC-AGAGGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACA 235 ||||| ||||||| | || || | |||| ||| |||| | ||||| | Sbjct 24810 AAATAGAGGATAATGGAATTTCTATTGGAGTGATAAAATACGTTGATAATAGAAGGAAGA 24751 Query 236 CCAATGGCGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAG 295 | |||||||||||| ||||| | |||||| || | |||||||| |||| || Sbjct 24750 TCTATGGCGAAGGCAATTATCTGGGTATATACTGACACTGAGAAACGAAAGCTTGGGTAG 24691 Query 296 CAAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGAT 337 | ||| ||||||||||||| ||||||||| || |||||||| Sbjct 24690 CGAACGGGATTAGATACCCCGGTAGTCCATGCTGTAAACGAT 24649 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1289552271904