Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20agathidicida_20[genbank_20GCA_5F001314445.1_202015- 10-14] 3,689 sequences; 37,238,500 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq139 217 4e-54 >seq139 Length=36859 Score = 217 bits (240), Expect = 4e-54 Identities = 208/268 (78%), Gaps = 9/268 (3%) Strand=Plus/Minus Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTT 72 |||||||||| | | ||||| |||||||||||| ||||||||||| | ||||| Sbjct 2139 GCATCTTCACGGATAATTCAAATTCACTGAGTCTATATTGGAGACAGCGGGGATGTCGTT 2080 Query 73 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 132 || |||||| |||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 2079 ACACCATTCATGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTCA 2020 Query 133 TTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAGCTAACCCCATC 192 |||||||||||||||||| ||| |||| || | || || ||| | | Sbjct 2019 GAGTTACGGCCGCCGTTTACTGGGACTTCCATTTAATGC---------GCAAACATCTCC 1969 Query 193 AATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTGCAG 252 || | ||||| |||||||||||| |||| ||||||||| || || | || |||| Sbjct 1968 TTTTTATCTTCCAGCACCGGGCAGGTGTCAGACCCTATACATCATGTTACCATTTAGCAG 1909 Query 253 AGTGCTGTGTTTTTAATAAACAGTCGCA 280 ||| || ||||||| |||||||||||| Sbjct 1908 AGTCCTAAGTTTTTATTAAACAGTCGCA 1881 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260753489088