Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phytophthora_20agathidicida_20[genbank_20GCA_5F001314445.1_202015-
10-14] 3,689 sequences; 37,238,500 total letters
Query= AAMG01000753.1
Length=364
Score E
Sequences producing significant alignments: (Bits) Value
seq139 230 5e-58
>seq139
Length=36859
Score = 230 bits (254), Expect = 5e-58
Identities = 272/373 (73%), Gaps = 24/373 (6%)
Strand=Plus/Minus
Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66
|||||||||| | | | ||| ||||| |||||||| | ||||||| | | |||||
Sbjct 2139 GCATCTTCACGGATAATTCAAATTCACTGAGTCTATATTGGAGACAGCGGGGATGTCGTT 2080
Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126
|| || ||| ||| |||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 2079 ACACCATTCATGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTCA 2020
Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAACAGATCC 186
||||||||||||||||||||||| || | | | | ||| | |||| |||
Sbjct 2019 GAGTTACGGCCGCCGTTTACTGGGACT---------TCCATTTAATGCGCAAACATCTCC 1969
Query 187 CCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCAG 246
|| | |||||||||||||||||| ||||| |||||||||| | || | | |||||||
Sbjct 1968 TTTTTATCTTCCAGCACCGGGCAGGTGTCAGACCCTATACATCATGTTACCATTTAGCAG 1909
Query 247 AAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCC------------ 294
| ||| |||||| ||||||||||| |||||| | || ||
Sbjct 1908 AGTCCTAAGTTTTTATTAAACAGTCGCAACCCCCTATTTTGTGACACCTACTTATTTAAA 1849
Query 295 ---TGTCATAGACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTT 351
| ||| | ||| || || |||| ||||||| ||||||||||||||||||||
Sbjct 1848 AATTTAAATAAATAGGTACTTTTTATCCCGAAGTTACAAAGTCATTTTGCCGAGTTCCTT 1789
Query 352 AACAATAGTTCTC 364
| |||||||||
Sbjct 1788 CAATATAGTTCTC 1776
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1062360808064
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |