Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20agathidicida_20[genbank_20GCA_5F001314445.1_202015- 10-14] 3,689 sequences; 37,238,500 total letters Query= AAMG01001138.1 Length=202 Score E Sequences producing significant alignments: (Bits) Value seq139 122 1e-25 >seq139 Length=36859 Score = 122 bits (134), Expect = 1e-25 Identities = 114/149 (77%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82 |||||||||| |||| | | |||| |||||||||| |||| | ||| ||||||| Sbjct 2170 CGGGGTCTTTCCGTCTAACTATAGAAAATCCGCATCTTCACGGATAATTCAAATTCACTG 2111 Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142 || | | ||||||| |||||||||| ||||||||||||||||||| Sbjct 2110 AGTCTATATTGGAGACAGCGGGGATGTCGTTACACCATTCATGCAGGTCGGAACTTACCC 2051 Query 143 GACAAGGAATTTCGCTACCTTAGGACCGT 171 ||||||||||||||||||||||||||||| Sbjct 2050 GACAAGGAATTTCGCTACCTTAGGACCGT 2022 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547180444611