Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phytophthora_20agathidicida_20[genbank_20GCA_5F001314445.1_202015-
10-14] 3,689 sequences; 37,238,500 total letters
Query= AAMG01002223.1
Length=366
Score E
Sequences producing significant alignments: (Bits) Value
seq139 78.8 2e-12
>seq139
Length=36859
Score = 78.8 bits (86), Expect = 2e-12
Identities = 157/230 (68%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 67 TTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTG 126
|||| ||| | || ||||| ||||||| | | || ||||| |||| | |
Sbjct 5349 TTTTCCTCCTTAATGAAAGAGCTTTACAACCTAATTAGCCGTCATCACTCACTCGGTATT 5290
Query 127 GCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTT 186
||||| ||| || ||| ||||| |||| ||||| ||||||||||| | |||||
Sbjct 5289 GCTGGATCAAGCTTTCGCTCATTGTCCAAAATTCCCCACTGCTGCCT-TTAAAAAAGTTT 5231
Query 187 GGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGG 246
|| |||||||||||| ||||||||| || | | || ||| | | ||| || ||||
Sbjct 5230 GGGCCGTGTCTCAGTCCCAATGTGGCTGATCATTCTTTCAAACCAGCTAAAGATAATAGG 5171
Query 247 CTAGGTGGGCCGTTACCCCGCCTACTACC-TAATGGAACGCATCCCCATC 295
|| ||| | | ||| | || |||||| |||| ||||| | ||||
Sbjct 5170 CTTGGTAGTCTTTTAAACTACCAACTACCATAATCTTACGCAAACTCATC 5121
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1068760571968
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |