Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20cactorum_20[genbank_20GCA_5F002081965.1_202017-04-07] 15,567 sequences; 67,815,075 total letters Query= AAMG01000599.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq15561 78.8 9e-13 seq15559 78.8 9e-13 seq15557 78.8 9e-13 seq15485 78.8 9e-13 seq15482 78.8 9e-13 seq15476 78.8 9e-13 seq15464 78.8 9e-13 seq15462 78.8 9e-13 seq15453 78.8 9e-13 seq15366 78.8 9e-13 seq15359 78.8 9e-13 seq15355 78.8 9e-13 seq15285 78.8 9e-13 seq15279 78.8 9e-13 seq15272 78.8 9e-13 seq15259 78.8 9e-13 >seq15561 Length=1714 Score = 78.8 bits (86), Expect = 9e-13 Identities = 69/86 (80%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 67 TGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTG 126 |||||||||||| ||||||| || ||||||| || | || || ||||||||| || Sbjct 449 TGCGACTGTTTAATAAAAACTTAGGACTCTGCTAAATGGTAACATGATGTATAGGGTCTG 390 Query 127 ACGCCTGCCCGGTGCCGGAAGGTTAA 152 || |||||||||||| ||||| |||| Sbjct 389 ACACCTGCCCGGTGCTGGAAGATTAA 364 >seq15559 Length=1054 Score = 78.8 bits (86), Expect = 9e-13 Identities = 69/86 (80%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 67 TGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTG 126 |||||||||||| ||||||| || ||||||| || | || || ||||||||| || Sbjct 125 TGCGACTGTTTAATAAAAACTTAGGACTCTGCTAAATGGTAACATGATGTATAGGGTCTG 66 Query 127 ACGCCTGCCCGGTGCCGGAAGGTTAA 152 || |||||||||||| ||||| |||| Sbjct 65 ACACCTGCCCGGTGCTGGAAGATTAA 40 >seq15557 Length=1304 Score = 78.8 bits (86), Expect = 9e-13 Identities = 69/86 (80%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 67 TGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTG 126 |||||||||||| ||||||| || ||||||| || | || || ||||||||| || Sbjct 966 TGCGACTGTTTAATAAAAACTTAGGACTCTGCTAAATGGTAACATGATGTATAGGGTCTG 1025 Query 127 ACGCCTGCCCGGTGCCGGAAGGTTAA 152 || |||||||||||| ||||| |||| Sbjct 1026 ACACCTGCCCGGTGCTGGAAGATTAA 1051 >seq15485 Length=1285 Score = 78.8 bits (86), Expect = 9e-13 Identities = 69/86 (80%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 67 TGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTG 126 |||||||||||| ||||||| || ||||||| || | || || ||||||||| || Sbjct 950 TGCGACTGTTTAATAAAAACTTAGGACTCTGCTAAATGGTAACATGATGTATAGGGTCTG 1009 Query 127 ACGCCTGCCCGGTGCCGGAAGGTTAA 152 || |||||||||||| ||||| |||| Sbjct 1010 ACACCTGCCCGGTGCTGGAAGATTAA 1035 >seq15482 Length=1256 Score = 78.8 bits (86), Expect = 9e-13 Identities = 69/86 (80%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 67 TGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTG 126 |||||||||||| ||||||| || ||||||| || | || || ||||||||| || Sbjct 1046 TGCGACTGTTTAATAAAAACTTAGGACTCTGCTAAATGGTAACATGATGTATAGGGTCTG 1105 Query 127 ACGCCTGCCCGGTGCCGGAAGGTTAA 152 || |||||||||||| ||||| |||| Sbjct 1106 ACACCTGCCCGGTGCTGGAAGATTAA 1131 >seq15476 Length=1330 Score = 78.8 bits (86), Expect = 9e-13 Identities = 69/86 (80%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 67 TGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTG 126 |||||||||||| ||||||| || ||||||| || | || || ||||||||| || Sbjct 1233 TGCGACTGTTTAATAAAAACTTAGGACTCTGCTAAATGGTAACATGATGTATAGGGTCTG 1292 Query 127 ACGCCTGCCCGGTGCCGGAAGGTTAA 152 || |||||||||||| ||||| |||| Sbjct 1293 ACACCTGCCCGGTGCTGGAAGATTAA 1318 >seq15464 Length=1265 Score = 78.8 bits (86), Expect = 9e-13 Identities = 69/86 (80%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 67 TGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTG 126 |||||||||||| ||||||| || ||||||| || | || || ||||||||| || Sbjct 763 TGCGACTGTTTAATAAAAACTTAGGACTCTGCTAAATGGTAACATGATGTATAGGGTCTG 822 Query 127 ACGCCTGCCCGGTGCCGGAAGGTTAA 152 || |||||||||||| ||||| |||| Sbjct 823 ACACCTGCCCGGTGCTGGAAGATTAA 848 >seq15462 Length=1580 Score = 78.8 bits (86), Expect = 9e-13 Identities = 69/86 (80%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 67 TGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTG 126 |||||||||||| ||||||| || ||||||| || | || || ||||||||| || Sbjct 742 TGCGACTGTTTAATAAAAACTTAGGACTCTGCTAAATGGTAACATGATGTATAGGGTCTG 801 Query 127 ACGCCTGCCCGGTGCCGGAAGGTTAA 152 || |||||||||||| ||||| |||| Sbjct 802 ACACCTGCCCGGTGCTGGAAGATTAA 827 >seq15453 Length=1708 Score = 78.8 bits (86), Expect = 9e-13 Identities = 69/86 (80%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 67 TGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTG 126 |||||||||||| ||||||| || ||||||| || | || || ||||||||| || Sbjct 1365 TGCGACTGTTTAATAAAAACTTAGGACTCTGCTAAATGGTAACATGATGTATAGGGTCTG 1424 Query 127 ACGCCTGCCCGGTGCCGGAAGGTTAA 152 || |||||||||||| ||||| |||| Sbjct 1425 ACACCTGCCCGGTGCTGGAAGATTAA 1450 >seq15366 Length=2026 Score = 78.8 bits (86), Expect = 9e-13 Identities = 69/86 (80%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 67 TGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTG 126 |||||||||||| ||||||| || ||||||| || | || || ||||||||| || Sbjct 1149 TGCGACTGTTTAATAAAAACTTAGGACTCTGCTAAATGGTAACATGATGTATAGGGTCTG 1090 Query 127 ACGCCTGCCCGGTGCCGGAAGGTTAA 152 || |||||||||||| ||||| |||| Sbjct 1089 ACACCTGCCCGGTGCTGGAAGATTAA 1064 >seq15359 Length=1436 Score = 78.8 bits (86), Expect = 9e-13 Identities = 69/86 (80%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 67 TGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTG 126 |||||||||||| ||||||| || ||||||| || | || || ||||||||| || Sbjct 899 TGCGACTGTTTAATAAAAACTTAGGACTCTGCTAAATGGTAACATGATGTATAGGGTCTG 958 Query 127 ACGCCTGCCCGGTGCCGGAAGGTTAA 152 || |||||||||||| ||||| |||| Sbjct 959 ACACCTGCCCGGTGCTGGAAGATTAA 984 >seq15355 Length=2659 Score = 78.8 bits (86), Expect = 9e-13 Identities = 69/86 (80%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 67 TGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTG 126 |||||||||||| ||||||| || ||||||| || | || || ||||||||| || Sbjct 1605 TGCGACTGTTTAATAAAAACTTAGGACTCTGCTAAATGGTAACATGATGTATAGGGTCTG 1546 Query 127 ACGCCTGCCCGGTGCCGGAAGGTTAA 152 || |||||||||||| ||||| |||| Sbjct 1545 ACACCTGCCCGGTGCTGGAAGATTAA 1520 >seq15285 Length=1983 Score = 78.8 bits (86), Expect = 9e-13 Identities = 69/86 (80%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 67 TGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTG 126 |||||||||||| ||||||| || ||||||| || | || || ||||||||| || Sbjct 878 TGCGACTGTTTAATAAAAACTTAGGACTCTGCTAAATGGTAACATGATGTATAGGGTCTG 937 Query 127 ACGCCTGCCCGGTGCCGGAAGGTTAA 152 || |||||||||||| ||||| |||| Sbjct 938 ACACCTGCCCGGTGCTGGAAGATTAA 963 >seq15279 Length=891 Score = 78.8 bits (86), Expect = 9e-13 Identities = 69/86 (80%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 67 TGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTG 126 |||||||||||| ||||||| || ||||||| || | || || ||||||||| || Sbjct 594 TGCGACTGTTTAATAAAAACTTAGGACTCTGCTAAATGGTAACATGATGTATAGGGTCTG 535 Query 127 ACGCCTGCCCGGTGCCGGAAGGTTAA 152 || |||||||||||| ||||| |||| Sbjct 534 ACACCTGCCCGGTGCTGGAAGATTAA 509 >seq15272 Length=1854 Score = 78.8 bits (86), Expect = 9e-13 Identities = 69/86 (80%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 67 TGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTG 126 |||||||||||| ||||||| || ||||||| || | || || ||||||||| || Sbjct 17 TGCGACTGTTTAATAAAAACTTAGGACTCTGCTAAATGGTAACATGATGTATAGGGTCTG 76 Query 127 ACGCCTGCCCGGTGCCGGAAGGTTAA 152 || |||||||||||| ||||| |||| Sbjct 77 ACACCTGCCCGGTGCTGGAAGATTAA 102 >seq15259 Length=1153 Score = 78.8 bits (86), Expect = 9e-13 Identities = 69/86 (80%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 67 TGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTG 126 |||||||||||| ||||||| || ||||||| || | || || ||||||||| || Sbjct 286 TGCGACTGTTTAATAAAAACTTAGGACTCTGCTAAATGGTAACATGATGTATAGGGTCTG 345 Query 127 ACGCCTGCCCGGTGCCGGAAGGTTAA 152 || |||||||||||| ||||| |||| Sbjct 346 ACACCTGCCCGGTGCTGGAAGATTAA 371 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476728096027