Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phytophthora_20cactorum_20[genbank_20GCA_5F002081965.1_202017-04-07]
15,567 sequences; 67,815,075 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq15194 293 4e-77
seq12582 152 8e-35
>seq15194
Length=945
Score = 293 bits (324), Expect = 4e-77
Identities = 209/239 (87%), Gaps = 7/239 (3%)
Strand=Plus/Minus
Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 240 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 181
Query 76 AAACTTCCATTGGCTGGA--AGCCAATAGTCCCTCTAAGAAGCC-----AGCCACCAACC 128
||||||| |||| | || | |||| ||||||||||||||| | | | |||||
Sbjct 180 CAACTTCCTTTGGTTTGATTACCCAAAAGTCCCTCTAAGAAGTCCACAAACCTACCAAAA 121
Query 129 ATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACA 188
|| || || |||||||||| | ||||||||||||||| ||||||||||||||||
Sbjct 120 ATGGTAAGCGGAACTATTTAGCACGCGGAGGTCTCGTTCGTTAACGGAATTAACCAGACA 61
Query 189 AATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCT 247
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 60 AATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCT 2
>seq12582
Length=1930
Score = 152 bits (168), Expect = 8e-35
Identities = 89/92 (97%), Gaps = 0/92 (0%)
Strand=Plus/Minus
Query 165 TTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACC 224
||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 114 TTCGTTAACGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCTATGCACCACC 55
Query 225 ACCCATAGAATCAAGAAAGAGCTATCAATCTG 256
||||||||||||||||||||||| ||||||||
Sbjct 54 ACCCATAGAATCAAGAAAGAGCTCTCAATCTG 23
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 796679838327
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |