Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phytophthora_20cactorum_20[genbank_20GCA_5F002081965.1_202017-04-07]
15,567 sequences; 67,815,075 total letters
Query= AAMG01001138.1
Length=202
Score E
Sequences producing significant alignments: (Bits) Value
seq15561 122 1e-25
seq15557 122 1e-25
seq15488 122 1e-25
seq15485 122 1e-25
seq15464 122 1e-25
seq15462 122 1e-25
seq15453 122 1e-25
seq15427 122 1e-25
seq15379 122 1e-25
seq15367 122 1e-25
seq15366 122 1e-25
seq15359 122 1e-25
seq15355 122 1e-25
seq15285 122 1e-25
seq15279 122 1e-25
seq15272 122 1e-25
seq15259 122 1e-25
seq15505 109 6e-22
seq15482 102 9e-20
>seq15561
Length=1714
Score = 122 bits (134), Expect = 1e-25
Identities = 114/149 (77%), Gaps = 0/149 (0%)
Strand=Plus/Plus
Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82
|||||||||| |||| | | |||| |||||||||| |||| | ||| |||||||
Sbjct 160 CGGGGTCTTTCCGTCTAACTATAGAAAATCCGCATCTTCACGGATAATTCAAATTCACTG 219
Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142
|| | | ||||||| |||||||||| |||||||||||||||||||
Sbjct 220 AGTCTATATTGGAGACAGCGGGGATGTCGTTACACCATTCATGCAGGTCGGAACTTACCC 279
Query 143 GACAAGGAATTTCGCTACCTTAGGACCGT 171
|||||||||||||||||||||||||||||
Sbjct 280 GACAAGGAATTTCGCTACCTTAGGACCGT 308
>seq15557
Length=1304
Score = 122 bits (134), Expect = 1e-25
Identities = 114/149 (77%), Gaps = 0/149 (0%)
Strand=Plus/Minus
Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82
|||||||||| |||| | | |||| |||||||||| |||| | ||| |||||||
Sbjct 1255 CGGGGTCTTTCCGTCTAACTATAGAAAATCCGCATCTTCACGGATAATTCAAATTCACTG 1196
Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142
|| | | ||||||| |||||||||| |||||||||||||||||||
Sbjct 1195 AGTCTATATTGGAGACAGCGGGGATGTCGTTACACCATTCATGCAGGTCGGAACTTACCC 1136
Query 143 GACAAGGAATTTCGCTACCTTAGGACCGT 171
|||||||||||||||||||||||||||||
Sbjct 1135 GACAAGGAATTTCGCTACCTTAGGACCGT 1107
>seq15488
Length=1401
Score = 122 bits (134), Expect = 1e-25
Identities = 114/149 (77%), Gaps = 0/149 (0%)
Strand=Plus/Plus
Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82
|||||||||| |||| | | |||| |||||||||| |||| | ||| |||||||
Sbjct 1157 CGGGGTCTTTCCGTCTAACTATAGAAAATCCGCATCTTCACGGATAATTCAAATTCACTG 1216
Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142
|| | | ||||||| |||||||||| |||||||||||||||||||
Sbjct 1217 AGTCTATATTGGAGACAGCGGGGATGTCGTTACACCATTCATGCAGGTCGGAACTTACCC 1276
Query 143 GACAAGGAATTTCGCTACCTTAGGACCGT 171
|||||||||||||||||||||||||||||
Sbjct 1277 GACAAGGAATTTCGCTACCTTAGGACCGT 1305
>seq15485
Length=1285
Score = 122 bits (134), Expect = 1e-25
Identities = 114/149 (77%), Gaps = 0/149 (0%)
Strand=Plus/Minus
Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82
|||||||||| |||| | | |||| |||||||||| |||| | ||| |||||||
Sbjct 1239 CGGGGTCTTTCCGTCTAACTATAGAAAATCCGCATCTTCACGGATAATTCAAATTCACTG 1180
Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142
|| | | ||||||| |||||||||| |||||||||||||||||||
Sbjct 1179 AGTCTATATTGGAGACAGCGGGGATGTCGTTACACCATTCATGCAGGTCGGAACTTACCC 1120
Query 143 GACAAGGAATTTCGCTACCTTAGGACCGT 171
|||||||||||||||||||||||||||||
Sbjct 1119 GACAAGGAATTTCGCTACCTTAGGACCGT 1091
>seq15464
Length=1265
Score = 122 bits (134), Expect = 1e-25
Identities = 114/149 (77%), Gaps = 0/149 (0%)
Strand=Plus/Minus
Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82
|||||||||| |||| | | |||| |||||||||| |||| | ||| |||||||
Sbjct 1052 CGGGGTCTTTCCGTCTAACTATAGAAAATCCGCATCTTCACGGATAATTCAAATTCACTG 993
Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142
|| | | ||||||| |||||||||| |||||||||||||||||||
Sbjct 992 AGTCTATATTGGAGACAGCGGGGATGTCGTTACACCATTCATGCAGGTCGGAACTTACCC 933
Query 143 GACAAGGAATTTCGCTACCTTAGGACCGT 171
|||||||||||||||||||||||||||||
Sbjct 932 GACAAGGAATTTCGCTACCTTAGGACCGT 904
>seq15462
Length=1580
Score = 122 bits (134), Expect = 1e-25
Identities = 114/149 (77%), Gaps = 0/149 (0%)
Strand=Plus/Minus
Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82
|||||||||| |||| | | |||| |||||||||| |||| | ||| |||||||
Sbjct 1031 CGGGGTCTTTCCGTCTAACTATAGAAAATCCGCATCTTCACGGATAATTCAAATTCACTG 972
Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142
|| | | ||||||| |||||||||| |||||||||||||||||||
Sbjct 971 AGTCTATATTGGAGACAGCGGGGATGTCGTTACACCATTCATGCAGGTCGGAACTTACCC 912
Query 143 GACAAGGAATTTCGCTACCTTAGGACCGT 171
|||||||||||||||||||||||||||||
Sbjct 911 GACAAGGAATTTCGCTACCTTAGGACCGT 883
>seq15453
Length=1708
Score = 122 bits (134), Expect = 1e-25
Identities = 114/149 (77%), Gaps = 0/149 (0%)
Strand=Plus/Minus
Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82
|||||||||| |||| | | |||| |||||||||| |||| | ||| |||||||
Sbjct 1654 CGGGGTCTTTCCGTCTAACTATAGAAAATCCGCATCTTCACGGATAATTCAAATTCACTG 1595
Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142
|| | | ||||||| |||||||||| |||||||||||||||||||
Sbjct 1594 AGTCTATATTGGAGACAGCGGGGATGTCGTTACACCATTCATGCAGGTCGGAACTTACCC 1535
Query 143 GACAAGGAATTTCGCTACCTTAGGACCGT 171
|||||||||||||||||||||||||||||
Sbjct 1534 GACAAGGAATTTCGCTACCTTAGGACCGT 1506
>seq15427
Length=1535
Score = 122 bits (134), Expect = 1e-25
Identities = 114/149 (77%), Gaps = 0/149 (0%)
Strand=Plus/Plus
Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82
|||||||||| |||| | | |||| |||||||||| |||| | ||| |||||||
Sbjct 1276 CGGGGTCTTTCCGTCTAACTATAGAAAATCCGCATCTTCACGGATAATTCAAATTCACTG 1335
Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142
|| | | ||||||| |||||||||| |||||||||||||||||||
Sbjct 1336 AGTCTATATTGGAGACAGCGGGGATGTCGTTACACCATTCATGCAGGTCGGAACTTACCC 1395
Query 143 GACAAGGAATTTCGCTACCTTAGGACCGT 171
|||||||||||||||||||||||||||||
Sbjct 1396 GACAAGGAATTTCGCTACCTTAGGACCGT 1424
>seq15379
Length=1752
Score = 122 bits (134), Expect = 1e-25
Identities = 114/149 (77%), Gaps = 0/149 (0%)
Strand=Plus/Minus
Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82
|||||||||| |||| | | |||| |||||||||| |||| | ||| |||||||
Sbjct 219 CGGGGTCTTTCCGTCTAACTATAGAAAATCCGCATCTTCACGGATAATTCAAATTCACTG 160
Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142
|| | | ||||||| |||||||||| |||||||||||||||||||
Sbjct 159 AGTCTATATTGGAGACAGCGGGGATGTCGTTACACCATTCATGCAGGTCGGAACTTACCC 100
Query 143 GACAAGGAATTTCGCTACCTTAGGACCGT 171
|||||||||||||||||||||||||||||
Sbjct 99 GACAAGGAATTTCGCTACCTTAGGACCGT 71
>seq15367
Length=1207
Score = 122 bits (134), Expect = 1e-25
Identities = 114/149 (77%), Gaps = 0/149 (0%)
Strand=Plus/Minus
Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82
|||||||||| |||| | | |||| |||||||||| |||| | ||| |||||||
Sbjct 155 CGGGGTCTTTCCGTCTAACTATAGAAAATCCGCATCTTCACGGATAATTCAAATTCACTG 96
Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142
|| | | ||||||| |||||||||| |||||||||||||||||||
Sbjct 95 AGTCTATATTGGAGACAGCGGGGATGTCGTTACACCATTCATGCAGGTCGGAACTTACCC 36
Query 143 GACAAGGAATTTCGCTACCTTAGGACCGT 171
|||||||||||||||||||||||||||||
Sbjct 35 GACAAGGAATTTCGCTACCTTAGGACCGT 7
>seq15366
Length=2026
Score = 122 bits (134), Expect = 1e-25
Identities = 114/149 (77%), Gaps = 0/149 (0%)
Strand=Plus/Plus
Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82
|||||||||| |||| | | |||| |||||||||| |||| | ||| |||||||
Sbjct 860 CGGGGTCTTTCCGTCTAACTATAGAAAATCCGCATCTTCACGGATAATTCAAATTCACTG 919
Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142
|| | | ||||||| |||||||||| |||||||||||||||||||
Sbjct 920 AGTCTATATTGGAGACAGCGGGGATGTCGTTACACCATTCATGCAGGTCGGAACTTACCC 979
Query 143 GACAAGGAATTTCGCTACCTTAGGACCGT 171
|||||||||||||||||||||||||||||
Sbjct 980 GACAAGGAATTTCGCTACCTTAGGACCGT 1008
>seq15359
Length=1436
Score = 122 bits (134), Expect = 1e-25
Identities = 114/149 (77%), Gaps = 0/149 (0%)
Strand=Plus/Minus
Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82
|||||||||| |||| | | |||| |||||||||| |||| | ||| |||||||
Sbjct 1188 CGGGGTCTTTCCGTCTAACTATAGAAAATCCGCATCTTCACGGATAATTCAAATTCACTG 1129
Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142
|| | | ||||||| |||||||||| |||||||||||||||||||
Sbjct 1128 AGTCTATATTGGAGACAGCGGGGATGTCGTTACACCATTCATGCAGGTCGGAACTTACCC 1069
Query 143 GACAAGGAATTTCGCTACCTTAGGACCGT 171
|||||||||||||||||||||||||||||
Sbjct 1068 GACAAGGAATTTCGCTACCTTAGGACCGT 1040
>seq15355
Length=2659
Score = 122 bits (134), Expect = 1e-25
Identities = 114/149 (77%), Gaps = 0/149 (0%)
Strand=Plus/Plus
Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82
|||||||||| |||| | | |||| |||||||||| |||| | ||| |||||||
Sbjct 1316 CGGGGTCTTTCCGTCTAACTATAGAAAATCCGCATCTTCACGGATAATTCAAATTCACTG 1375
Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142
|| | | ||||||| |||||||||| |||||||||||||||||||
Sbjct 1376 AGTCTATATTGGAGACAGCGGGGATGTCGTTACACCATTCATGCAGGTCGGAACTTACCC 1435
Query 143 GACAAGGAATTTCGCTACCTTAGGACCGT 171
|||||||||||||||||||||||||||||
Sbjct 1436 GACAAGGAATTTCGCTACCTTAGGACCGT 1464
>seq15285
Length=1983
Score = 122 bits (134), Expect = 1e-25
Identities = 114/149 (77%), Gaps = 0/149 (0%)
Strand=Plus/Minus
Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82
|||||||||| |||| | | |||| |||||||||| |||| | ||| |||||||
Sbjct 1167 CGGGGTCTTTCCGTCTAACTATAGAAAATCCGCATCTTCACGGATAATTCAAATTCACTG 1108
Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142
|| | | ||||||| |||||||||| |||||||||||||||||||
Sbjct 1107 AGTCTATATTGGAGACAGCGGGGATGTCGTTACACCATTCATGCAGGTCGGAACTTACCC 1048
Query 143 GACAAGGAATTTCGCTACCTTAGGACCGT 171
|||||||||||||||||||||||||||||
Sbjct 1047 GACAAGGAATTTCGCTACCTTAGGACCGT 1019
>seq15279
Length=891
Score = 122 bits (134), Expect = 1e-25
Identities = 114/149 (77%), Gaps = 0/149 (0%)
Strand=Plus/Plus
Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82
|||||||||| |||| | | |||| |||||||||| |||| | ||| |||||||
Sbjct 305 CGGGGTCTTTCCGTCTAACTATAGAAAATCCGCATCTTCACGGATAATTCAAATTCACTG 364
Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142
|| | | ||||||| |||||||||| |||||||||||||||||||
Sbjct 365 AGTCTATATTGGAGACAGCGGGGATGTCGTTACACCATTCATGCAGGTCGGAACTTACCC 424
Query 143 GACAAGGAATTTCGCTACCTTAGGACCGT 171
|||||||||||||||||||||||||||||
Sbjct 425 GACAAGGAATTTCGCTACCTTAGGACCGT 453
>seq15272
Length=1854
Score = 122 bits (134), Expect = 1e-25
Identities = 114/149 (77%), Gaps = 0/149 (0%)
Strand=Plus/Minus
Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82
|||||||||| |||| | | |||| |||||||||| |||| | ||| |||||||
Sbjct 306 CGGGGTCTTTCCGTCTAACTATAGAAAATCCGCATCTTCACGGATAATTCAAATTCACTG 247
Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142
|| | | ||||||| |||||||||| |||||||||||||||||||
Sbjct 246 AGTCTATATTGGAGACAGCGGGGATGTCGTTACACCATTCATGCAGGTCGGAACTTACCC 187
Query 143 GACAAGGAATTTCGCTACCTTAGGACCGT 171
|||||||||||||||||||||||||||||
Sbjct 186 GACAAGGAATTTCGCTACCTTAGGACCGT 158
>seq15259
Length=1153
Score = 122 bits (134), Expect = 1e-25
Identities = 114/149 (77%), Gaps = 0/149 (0%)
Strand=Plus/Minus
Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82
|||||||||| |||| | | |||| |||||||||| |||| | ||| |||||||
Sbjct 575 CGGGGTCTTTCCGTCTAACTATAGAAAATCCGCATCTTCACGGATAATTCAAATTCACTG 516
Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142
|| | | ||||||| |||||||||| |||||||||||||||||||
Sbjct 515 AGTCTATATTGGAGACAGCGGGGATGTCGTTACACCATTCATGCAGGTCGGAACTTACCC 456
Query 143 GACAAGGAATTTCGCTACCTTAGGACCGT 171
|||||||||||||||||||||||||||||
Sbjct 455 GACAAGGAATTTCGCTACCTTAGGACCGT 427
>seq15505
Length=1439
Score = 109 bits (120), Expect = 6e-22
Identities = 107/142 (75%), Gaps = 0/142 (0%)
Strand=Plus/Plus
Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82
|||||||||| |||| | | |||| |||||||||| |||| | ||| |||||||
Sbjct 1298 CGGGGTCTTTCCGTCTAACTATAGAAAATCCGCATCTTCACGGATAATTCAAATTCACTG 1357
Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142
|| | | ||||||| |||||||||| |||||||||||||||||||
Sbjct 1358 AGTCTATATTGGAGACAGCGGGGATGTCGTTACACCATTCATGCAGGTCGGAACTTACCC 1417
Query 143 GACAAGGAATTTCGCTACCTTA 164
||||||||||||||||||||||
Sbjct 1418 GACAAGGAATTTCGCTACCTTA 1439
>seq15482
Length=1256
Score = 102 bits (112), Expect = 9e-20
Identities = 58/59 (98%), Gaps = 0/59 (0%)
Strand=Plus/Minus
Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGT 171
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1245 TACACCATTCATGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGT 1187
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547117479333
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |