Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20cactorum_20[genbank_20GCA_5F002081965.1_202017-04-07] 15,567 sequences; 67,815,075 total letters Query= AAMG01001432.1 Length=344 Score E Sequences producing significant alignments: (Bits) Value seq15383 116 7e-24 seq15376 116 7e-24 seq378 116 7e-24 >seq15383 Length=1287 Score = 116 bits (128), Expect = 7e-24 Identities = 137/183 (75%), Gaps = 2/183 (1%) Strand=Plus/Minus Query 7 GCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCT 66 |||| |||| | |||| | |||||| ||| || |||||||||||||| | ||| | Sbjct 1108 GCTGGATCAAGCTTTCGCTCATTGTCCAAAATTCCCCACTGCTGCCTTTAAAAA-AGTTT 1050 Query 67 GGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGG 126 |||||||||||||||||||||||||| | ||| || ||| || |||| ||| | || Sbjct 1049 GGGCCGTGTCTCAGTCCCAATGTGGCTGATCATTCTTTCAAACCAGCTAAAGATAATAGG 990 Query 127 CTTGGTGGGCTATTATCTCACCAACTACC-TAATCGGCCGCGAGCCCATCTTTCAGCGAT 185 |||||| | || ||| |||||||||| ||||| ||| | | ||||||| | || | Sbjct 989 CTTGGTAGTCTTTTAAACTACCAACTACCATAATCTTGCGCAAACTCATCTTTTAACGTT 930 Query 186 AAA 188 ||| Sbjct 929 AAA 927 >seq15376 Length=1158 Score = 116 bits (128), Expect = 7e-24 Identities = 137/183 (75%), Gaps = 2/183 (1%) Strand=Plus/Minus Query 7 GCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCT 66 |||| |||| | |||| | |||||| ||| || |||||||||||||| | ||| | Sbjct 1153 GCTGGATCAAGCTTTCGCTCATTGTCCAAAATTCCCCACTGCTGCCTTTAAAAA-AGTTT 1095 Query 67 GGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGG 126 |||||||||||||||||||||||||| | ||| || ||| || |||| ||| | || Sbjct 1094 GGGCCGTGTCTCAGTCCCAATGTGGCTGATCATTCTTTCAAACCAGCTAAAGATAATAGG 1035 Query 127 CTTGGTGGGCTATTATCTCACCAACTACC-TAATCGGCCGCGAGCCCATCTTTCAGCGAT 185 |||||| | || ||| |||||||||| ||||| ||| | | ||||||| | || | Sbjct 1034 CTTGGTAGTCTTTTAAACTACCAACTACCATAATCTTGCGCAAACTCATCTTTTAACGTT 975 Query 186 AAA 188 ||| Sbjct 974 AAA 972 >seq378 Length=3253 Score = 116 bits (128), Expect = 7e-24 Identities = 137/183 (75%), Gaps = 2/183 (1%) Strand=Plus/Minus Query 7 GCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCT 66 |||| |||| | |||| | |||||| ||| || |||||||||||||| | ||| | Sbjct 3189 GCTGGATCAAGCTTTCGCTCATTGTCCAAAATTCCCCACTGCTGCCTTTAAAAA-AGTTT 3131 Query 67 GGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGG 126 |||||||||||||||||||||||||| | ||| || ||| || |||| ||| | || Sbjct 3130 GGGCCGTGTCTCAGTCCCAATGTGGCTGATCATTCTTTCAAACCAGCTAAAGATAATAGG 3071 Query 127 CTTGGTGGGCTATTATCTCACCAACTACC-TAATCGGCCGCGAGCCCATCTTTCAGCGAT 185 |||||| | || ||| |||||||||| ||||| ||| | | ||||||| | || | Sbjct 3070 CTTGGTAGTCTTTTAAACTACCAACTACCATAATCTTGCGCAAACTCATCTTTTAACGTT 3011 Query 186 AAA 188 ||| Sbjct 3010 AAA 3008 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 998244579072