Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20cactorum_20[genbank_20GCA_5F002081965.1_202017-04-07] 15,567 sequences; 67,815,075 total letters Query= AAMG01001821.1 Length=161 Score E Sequences producing significant alignments: (Bits) Value seq15385 91.5 1e-16 seq15384 91.5 1e-16 seq15253 91.5 1e-16 seq15245 91.5 1e-16 >seq15385 Length=1235 Score = 91.5 bits (100), Expect = 1e-16 Identities = 61/68 (90%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 81 TACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCATGAGGACTTGACGTCATCCC 140 || ||||||| ||||||| ||||| || |||||||||||||| |||||||||||||||| Sbjct 658 TATCATTGTAGCACGTGTGTAGCCCAACTCATAAGGGCCATGAAGACTTGACGTCATCCC 717 Query 141 CACCTTCC 148 |||||||| Sbjct 718 CACCTTCC 725 >seq15384 Length=1126 Score = 91.5 bits (100), Expect = 1e-16 Identities = 61/68 (90%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 81 TACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCATGAGGACTTGACGTCATCCC 140 || ||||||| ||||||| ||||| || |||||||||||||| |||||||||||||||| Sbjct 786 TATCATTGTAGCACGTGTGTAGCCCAACTCATAAGGGCCATGAAGACTTGACGTCATCCC 727 Query 141 CACCTTCC 148 |||||||| Sbjct 726 CACCTTCC 719 >seq15253 Length=1471 Score = 91.5 bits (100), Expect = 1e-16 Identities = 61/68 (90%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 81 TACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCATGAGGACTTGACGTCATCCC 140 || ||||||| ||||||| ||||| || |||||||||||||| |||||||||||||||| Sbjct 823 TATCATTGTAGCACGTGTGTAGCCCAACTCATAAGGGCCATGAAGACTTGACGTCATCCC 882 Query 141 CACCTTCC 148 |||||||| Sbjct 883 CACCTTCC 890 >seq15245 Length=978 Score = 91.5 bits (100), Expect = 1e-16 Identities = 61/68 (90%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 81 TACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCATGAGGACTTGACGTCATCCC 140 || ||||||| ||||||| ||||| || |||||||||||||| |||||||||||||||| Sbjct 363 TATCATTGTAGCACGTGTGTAGCCCAACTCATAAGGGCCATGAAGACTTGACGTCATCCC 422 Query 141 CACCTTCC 148 |||||||| Sbjct 423 CACCTTCC 430 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 415937264990