Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20cambivora_20[genbank_20GCA_5F000443045.1_202013-08- 07] 72,332 sequences; 230,616,123 total letters Query= NC_031927.1 Length=216121 Score E Sequences producing significant alignments: (Bits) Value seq29114 87.8 2e-12 >seq29114 Length=3532 Score = 87.8 bits (96), Expect = 2e-12 Identities = 157/224 (70%), Gaps = 4/224 (2%) Strand=Plus/Plus Query 162616 GGTATTCTATTCAATCACGAAAGCTCACGCAGAGGAGAGACGTTCGTCACACGCAAGATC 162675 || ||| ||||||| ||||||||| | || | ||| || |||||||| ||||||||| Sbjct 1919 GGGATTTTATTCAACCACGAAAGCCCCCGACGTGGACCAACCTTCGTCACTCGCAAGATC 1978 Query 162676 GTCCGAGCC-TTGTCCCGAATTAGTG-TGGGACTCCAAAGTGATCTACAACTTGGAAACC 162733 |||||| |||| | | ||| ||| ||| | | ||||| || | || |||| Sbjct 1979 ACCCGAGCTGTTGTGC-GCATTCGTGCTGGTATTGAGAAGTGC-CTCTTTGTGGGGAACC 2036 Query 162734 TCAATGCCCGACGTGACTGGGGACACGCCAAAGACTACGTAGAGGCTATGTGGTTGATGC 162793 || | || ||||||||||| ||||| |||||||| ||| |||||| |||| Sbjct 2037 TCGACGCGAAGCGTGACTGGGGTCACGCTCGCGACTACGTGGAGTGCATGTGGCGAATGC 2096 Query 162794 TTCAGCAAGAGAAGCCAGATGATTATGTGATCGCAACTGGTGAG 162837 |||| || || | || ||||||| ||| | || || || ||| Sbjct 2097 TTCAACACGATACTCCGGATGATTTTGTTGTTGCTACAGGAGAG 2140 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 690834017164320