Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20cinnamomi_20[genbank_20GCA_5F001314365.1_202015-10- 14] 5,777 sequences; 53,691,444 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq1027 309 5e-82 >seq1027 Length=18264 Score = 309 bits (342), Expect = 5e-82 Identities = 219/250 (88%), Gaps = 7/250 (3%) Strand=Plus/Minus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 7962 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 7903 Query 76 AAACTTCCATTGGCTGGA--AGCCAATAGTCCCTCTAAGAAGCC-----AGCCACCAACC 128 ||||||| |||| | || | |||| ||||||||||||||| | | | ||||| Sbjct 7902 CAACTTCCTTTGGTTTGATTACCCAAAAGTCCCTCTAAGAAGTCCACAAACCTACCAAAA 7843 Query 129 ATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACA 188 || || | | |||||||||| | ||||||||||||||| |||||||||||||||| Sbjct 7842 ATGGTAAGCGAGACTATTTAGCACGCGGAGGTCTCGTTCGTTAACGGAATTAACCAGACA 7783 Query 189 AATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTA 248 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 7782 AATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTC 7723 Query 249 TCAATCTGTC 258 |||||||||| Sbjct 7722 TCAATCTGTC 7713 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796755407337