Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20cryptogea_20[genbank_20GCA_5F000468175.2_202016-07- 21] 19,533 sequences; 63,839,274 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq6477 78.8 3e-12 seq2714 78.8 3e-12 >seq6477 Length=1243 Score = 78.8 bits (86), Expect = 3e-12 Identities = 106/143 (74%), Gaps = 6/143 (4%) Strand=Plus/Minus Query 323 TATGATTTGGGCTACACACGTGCTACAATGGACAAT-ACAAAG---GGCAGCGAAACCGC 378 ||||| |||||||||||||||||||||||| | ||| |||| | |||| | | Sbjct 141 TATGAGTTGGGCTACACACGTGCTACAATG-ATAATCACAATGAGAGGCAATAATAATAA 83 Query 379 GAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGATTGTAGTCTGCAACTCGACTA 438 || | |||||||| ||| || | || |||||||||| | ||| |||||| | Sbjct 82 AAGTTGGAGCAAATCTTTAAAAATTAT-CTTAGTTCGGATTAAGGGCTGAAACTCGCCCT 24 Query 439 TATGAAGCTGGAATCGCTAGTAA 461 ||||||| ||||||||||||||| Sbjct 23 TATGAAGTTGGAATCGCTAGTAA 1 >seq2714 Length=211 Score = 78.8 bits (86), Expect = 3e-12 Identities = 55/63 (87%), Gaps = 0/63 (0%) Strand=Plus/Minus Query 430 ACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGCATGCTACGGTGAATAC 489 ||||| | ||||||| |||||||||||||||||| ||| ||||||||| ||||||||| Sbjct 211 ACTCGCCCTTATGAAGTTGGAATCGCTAGTAATCGCAGAACAGCATGCTGCGGTGAATAT 152 Query 490 GTT 492 ||| Sbjct 151 GTT 149 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503706223680