Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20cryptogea_20[genbank_20GCA_5F000468175.2_202016-07- 21] 19,533 sequences; 63,839,274 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq9255 190 3e-46 seq15189 98.7 2e-18 >seq9255 Length=1686 Score = 190 bits (210), Expect = 3e-46 Identities = 140/162 (86%), Gaps = 2/162 (1%) Strand=Plus/Plus Query 99 ATAGTCCCTCTAAGAAGCCAGCCACCAACCATAG--TCGATGGGGCTATTTAGCAGGTTA 156 ||||||||||||||||||| ||| || | || | | |||| |||||||| | Sbjct 1373 ATAGTCCCTCTAAGAAGCCGGCCGTGAAGGGATGCCTCCACGTAGCTAGTTAGCAGGCTG 1432 Query 157 AGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCAT 216 ||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| Sbjct 1433 AGGTCTCGTTCGTTAACGGAATTAACCAGACAAATCGCTCCACCAACTAAGAACGGCCAT 1492 Query 217 GCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||||||||||||||||||||||||||| ||| |||||| Sbjct 1493 GCACCACCACCCATAGAATCAAGAAAGAGCTCTCAGTCTGTC 1534 >seq15189 Length=2982 Score = 98.7 bits (108), Expect = 2e-18 Identities = 57/59 (97%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 200 CAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| Sbjct 1139 CAACTAAGAACGGCCATGCACCACCACCCATAGAATCATGAAAGAGCTCTCAATCTGTC 1081 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796649224773