Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20cryptogea_20[genbank_20GCA_5F000468175.2_202016-07- 21] 19,533 sequences; 63,839,274 total letters Query= AAMG01002180.1 Length=500 Score E Sequences producing significant alignments: (Bits) Value seq13414 159 1e-36 >seq13414 Length=454 Score = 159 bits (176), Expect = 1e-36 Identities = 200/268 (75%), Gaps = 6/268 (2%) Strand=Plus/Plus Query 161 GCGTCTGATTA-GCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGAC 219 |||| ||||| | ||||||||| ||| | ||||||| | | ||| |||| | Sbjct 189 GCGTAAGATTATGGTAGTTGGTAGTTTAATAGACTACCAAGCCTATTATCTTTAGCTGGT 248 Query 220 CTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAG 279 ||| || ||||| |||||||||| |||||||||||| ||||||| | |||||| Sbjct 249 TTGAAAGAATGATCAGCCACATTGGGACTGAGACACGGCCCAAACTTTTTTAA-AGGCAG 307 Query 280 CAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGA 339 ||||||||||| ||| |||||| || |||| |||| |||||| ||| ||||| || || Sbjct 308 CAGTGGGGAATTTTGGACAATGAGCGGAAGCTTGATCCAGCAATACCGAGTGAGTGAAGA 367 Query 340 AGGC-CTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGATAATGACGGTACTTGAGGAGGA 398 |||| | ||| ||||| |||| || | ||||| || |||||| |||||| | | || Sbjct 368 AGGCTAATTAGGTTGTAAAACTCTTTCATTAAGGAGGAAAATGACAGTACTTAAAAAAGA 427 Query 399 AGCCCCGGCTAACTA--CGTGCCAGCAG 424 || |||||||| || ||||||||||| Sbjct 428 AGTTCCGGCTAA-TACCCGTGCCAGCAG 454 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1497307473792