Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20cryptogea_20[genbank_20GCA_5F000468175.2_202016-07- 21] 19,533 sequences; 63,839,274 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq6153 187 5e-45 seq9255 140 6e-31 >seq6153 Length=982 Score = 187 bits (206), Expect = 5e-45 Identities = 143/167 (86%), Gaps = 2/167 (1%) Strand=Plus/Plus Query 162 CTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTA 221 ||||||||| | ||||||||||| ||||||||||| ||| | |||||||||| | | Sbjct 1 CTACACTGATGTATTCAACGAGTTCA-CACCTTGGCCGACAGGCCCGGGTAATCTT-TGA 58 Query 222 AACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAG 281 || | ||||| |||||||||| |||||||||| ||| ||||||||||||||| ||||| Sbjct 59 AATTTCATCGTGATGGGGATAGATCATTGCAATTGTTGGTCTTCAACGAGGAATTCCTAG 118 Query 282 TAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 |||||||| ||||||||| |||||||| ||||||||||||||||||| Sbjct 119 TAAGCGCGAGTCATCAGCTCGCGTTGACTACGTCCCTGCCCTTTGTA 165 >seq9255 Length=1686 Score = 140 bits (154), Expect = 6e-31 Identities = 89/97 (92%), Gaps = 0/97 (0%) Strand=Plus/Minus Query 232 TGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTG 291 || |||||||||| |||||||||| ||| ||||||||||||||| ||||||||||||| | Sbjct 1230 TGATGGGGATAGATCATTGCAATTGTTGGTCTTCAACGAGGAATTCCTAGTAAGCGCGAG 1171 Query 292 TCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 |||||||| |||||||| ||||||||||||||||||| Sbjct 1170 TCATCAGCTCGCGTTGACTACGTCCCTGCCCTTTGTA 1134 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947014983424