Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20cryptogea_20[genbank_20GCA_5F000468175.2_202016-07- 21] 19,533 sequences; 63,839,274 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq11578 259 2e-66 seq8120 208 2e-51 seq18412 114 4e-23 seq6851 114 4e-23 >seq11578 Length=907 Score = 259 bits (286), Expect = 2e-66 Identities = 148/151 (98%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 300 GGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATA 359 |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct 1 GGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATA 60 Query 360 GTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACG 419 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 GTAGACAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACG 120 Query 420 AGGCATTTGGCTACCTTAAGAGAGTCATAGT 450 ||||||||||||||||||||||||||||||| Sbjct 121 AGGCATTTGGCTACCTTAAGAGAGTCATAGT 151 Score = 100 bits (110), Expect = 9e-19 Identities = 62/66 (94%), Gaps = 3/66 (5%) Strand=Plus/Plus Query 208 GTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTATTCTACACCTCTCAAGTCATT 267 ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| Sbjct 845 GTAGTGGTATTTCACTTGCGCCGGA---GCTCCCACTTATTCTACACCTCTCAAGTCATT 901 Query 268 TCACAA 273 |||||| Sbjct 902 TCACAA 907 >seq8120 Length=2716 Score = 208 bits (230), Expect = 2e-51 Identities = 120/123 (98%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 350 TCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAA 409 |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 2594 TCGCTAGACAGTAGATAGGGACAGTGGGAATCTCATTAATCCATTCATGCGCGTCACTAG 2653 Query 410 TTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCG 469 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2654 TTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCG 2713 Query 470 CGC 472 ||| Sbjct 2714 CGC 2716 >seq18412 Length=22968 Score = 114 bits (126), Expect = 4e-23 Identities = 66/68 (97%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 466 CCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTG 525 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 22968 CCCGCGCTTGGTTGAATCTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTG 22909 Query 526 CGTCAACA 533 ||||||| Sbjct 22908 TGTCAACA 22901 >seq6851 Length=3701 Score = 114 bits (126), Expect = 4e-23 Identities = 66/68 (97%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 466 CCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTG 525 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 2758 CCCGCGCTTGGTTGAATCTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTG 2699 Query 526 CGTCAACA 533 ||||||| Sbjct 2698 TGTCAACA 2691 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1634880596384