Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20fragariae_20[genbank_20GCA_5F000686205.3_202014-12- 01] 1,616 sequences; 73,680,304 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq1188 129 1e-27 >seq1188 Length=38059 Score = 129 bits (142), Expect = 1e-27 Identities = 141/184 (77%), Gaps = 4/184 (2%) Strand=Plus/Plus Query 119 ATACATTAGCATGGAATAATAGAATAGGACGTGCGGT--TCTATTTTGTTGGTTTCTAGG 176 ||| ||||| ||||||||||| ||| | | | ||| |||||||||||||||| | Sbjct 17730 ATATATTAGTATGGAATAATAAGATACGGCTTT-GGTAGTCTATTTTGTTGGTTTGCAC- 17787 Query 177 ACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAA 236 || || |||||||||||||| ||| |||||||| |||| | |||||||||||| Sbjct 17788 ACTAGGGTTATGATTAATAGGGACAGTTGGGGGTGTATATATTTCAACGTCAGAGGTGAA 17847 Query 237 ATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTA 296 ||||||||||| | |||| | || |||||||| || ||||||||| | ||||||| Sbjct 17848 ATTCTTGGATTGCTGAAAGATGAGCTTAGGCGAAAGCATTTACCAAGGATATGTTCATTA 17907 Query 297 ATCA 300 |||| Sbjct 17908 ATCA 17911 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915185210368