Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20fragariae_20[genbank_20GCA_5F000686205.3_202014-12- 01] 1,616 sequences; 73,680,304 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq919 123 4e-26 seq357 123 4e-26 seq699 84.2 3e-14 >seq919 Length=62042 Score = 123 bits (136), Expect = 4e-26 Identities = 71/73 (97%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1375 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 1316 Query 76 AAACTTCCATTGG 88 ||||||| |||| Sbjct 1315 CAACTTCCTTTGG 1303 >seq357 Length=119206 Score = 123 bits (136), Expect = 4e-26 Identities = 89/102 (87%), Gaps = 2/102 (2%) Strand=Plus/Minus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 ||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| || Sbjct 84053 TCAGTGTAGAGCGCGTGCGGGCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCATC 83994 Query 76 AAACTTCCATTGGCTGGA--AGCCAATAGTCCCTCTAAGAAG 115 ||||||| |||| | || | || ||||||||||||||| Sbjct 83993 CAACTTCCTTTGGTTTGATTATCCTCAAGTCCCTCTAAGAAG 83952 >seq699 Length=104952 Score = 84.2 bits (92), Expect = 3e-14 Identities = 54/59 (92%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 74 ||||||||| ||||||||||| |||||| | |||||||||||||||||||||||| ||| Sbjct 40936 TCAGTGTAGTGCGCGTGCGGCTCAGAACGTTTAAGGGCATCACAGACCTGTTATTTCCT 40878 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796787526096